Table 3.
Percentage per base error rates in pyrosequencing reads before and after application of denoising algorithms
| Name | Raw | AmpliconNoise | SLP 1% | SLP 2% | DeNoiser |
|---|---|---|---|---|---|
| Divergent | 0.4519% | 0.1877% | 0.8030% | 0.7960% | 0.1987% |
| Artificial | 0.3678% | 0.2469% | 1.1733% | 1.1891% | 0.5605% |
| Even1 | 0.8767% | 0.6381% | 1.6990% | 2.3572% | 0.7585% |
| Even2 | 0.8870% | 0.6456% | 1.7906% | 2.1536% | 0.7986% |
| Even3 | 0.8446% | 0.5935% | 1.9895% | 2.4594% | 0.8033% |
| Uneven1 | 1.1852% | 0.8998% | 1.9687% | 1.7756% | 1.0897% |
| Uneven2 | 0.6713% | 0.4851% | 1.7549% | 2.6078% | 0.6646% |
| Uneven3 | 0.6560% | 0.4344% | 1.3370% | 2.0822% | 0.4913% |
| Titanium - σs = 0.1 | 0.4576% | 0.1427% | 0.5830% | 0.7012% | 0.3793% |
| Titanium - σs = 0.04 | 0.1325% |