Table 3.
Result of experiment two: comparison of different feature sets
F1 | F1+TS | F1+OF | ||||||||
---|---|---|---|---|---|---|---|---|---|---|
P | R | F | P | R | F | P | R | F | ||
fly | 0.78 | 0.929 | 0.848 | 0.97 | 0.97 | 0.97 | 0.792 | 0.931 | 0.856 | |
NB | mouse | 0.81 | 0.68 | 0.739 | 0.826 | 0.95 | 0.884 | 0.821 | 0.685 | 0.747 |
yeast | 0.75 | 0.727 | 0.738 | 0.929 | 0.788 | 0.852 | 0.762 | 0.731 | 0.746 | |
fly | 0.762 | 0.868 | 0.802 | 0.965 | 0.952 | 0.958 | 0.771 | 0.87 | 0.818 | |
CRF | mouse | 0.789 | 0.7 | 0.73 | 0.814 | 0.878 | 0.845 | 0.791 | 0.71 | 0.748 |
yeast | 0.734 | 0.725 | 0.723 | 0.902 | 0.786 | 0.84 | 0.739 | 0.73 | 0.734 | |
F1+NT | F1+ADN | F1+TS+OF+NT+ADN | ||||||||
P | R | F | P | R | F | P | R | F | ||
fly | 0.775 | 0.825 | 0.799 | 0.812 | 0.931 | 0.867 | 0.971 | 0.972 | 0.971 | |
NB | mouse | 0.823 | 0.621 | 0.708 | 0.823 | 0.712 | 0.763 | 0.827 | 0.953 | 0.886 |
yeast | 0.752 | 0.723 | 0.737 | 0.786 | 0.987 | 0.875 | 0.931 | 0.791 | 0.855 | |
fly | 0.753 | 0.877 | 0.81 | 0.773 | 0.887 | 0.826 | 0.966 | 0.954 | 0.96 | |
CRF | mouse | 0.865 | 0.698 | 0.773 | 0.792 | 0.714 | 0.751 | 0.817 | 0.878 | 0.846 |
yeast | 0.729 | 0.727 | 0.728 | 0.762 | 0.751 | 0.756 | 0.901 | 0.788 | 0.841 |
F1: basic features used to train the model were GN, MH, DT, JN.