Table 1.
ROS1 variant | 5-meC:G |
T:G |
||||
---|---|---|---|---|---|---|
Pmax (nM) | T50 (h) | Erel | Pmax (nM) | T50 (h) | Erel | |
WT | 10.24 ± 0.17 | 3.30 | 3.10 ± 0.05 | 7.64 ± 0.18 | 4.83 | 1.58 ± 0.04 |
Q584L | 12.23 ± 0.45 | 5.07 | 2.41 ± 0.09 | 9.93 ± 0.51 | 5.42 | 1.83 ± 0.09 |
F589A | 1.84 ± 0.11 | 5.10 | 0.36 ± 0.02 | 3.22 ± 0.21 | 4.76 | 0.68 ± 0.04 |
T606L | n.d.b | n.a.c | n.a. | n.d. | n.a. | n.a. |
Q607A | 1.19 ± 0.09 | 2.63 | 0.45 ± 0.04 | 0.29 ± 0.04 | 0.62 | 0.48 ± 0.06 |
N608A | 13.64 ± 0.35 | 4.73 | 2.88 ± 0.07 | 12.07 ± 0.33 | 9.38 | 1.29 ± 0.04 |
D611V | n.d. | n.a. | n.a. | n.d. | n.a. | n.a. |
W1012A | 7.99 ± 0.27 | 5.01 | 1.60 ± 0.06 | 5.41 ± 0.45 | 6.62 | 0.82 ± 0.07 |
Y1028S | 7.76 ± 0.22 | 5.11 | 1.50 ± 0.04 | 10.87 ± 0.62 | 5.66 | 1.92 ± 0.11 |
aPurified proteins (20 nM) were incubated at 30°C with 51-mer double-stranded oligonucleotide substrates (20 nM) containing either a single 5-meC:G pair or a T:G mispair. Reaction products were separated in a 12% denaturing polyacrylamide gel and quantified by fluorescence scanning. Shown are the plateau levels of substrate nicking (Pmax) and the time required for processing of 50% of Pmax (T50). Relative processing efficiency was calculated as Erel = Pmax/T50. Values are mean ± SE from two independent experiments.
bn.d., none detected.
cn.a., not applicable.