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. 2010 Oct 29;39(4):1473–1484. doi: 10.1093/nar/gkq982

Table 1.

Relative substrate processing efficiencies of WT and mutant variants of ROS1a

ROS1 variant 5-meC:G
T:G
Pmax (nM) T50 (h) Erel Pmax (nM) T50 (h) Erel
WT 10.24 ± 0.17 3.30 3.10 ± 0.05 7.64 ± 0.18 4.83 1.58 ± 0.04
Q584L 12.23 ± 0.45 5.07 2.41 ± 0.09 9.93 ± 0.51 5.42 1.83 ± 0.09
F589A 1.84 ± 0.11 5.10 0.36 ± 0.02 3.22 ± 0.21 4.76 0.68 ± 0.04
T606L n.d.b n.a.c n.a. n.d. n.a. n.a.
Q607A 1.19 ± 0.09 2.63 0.45 ± 0.04 0.29 ± 0.04 0.62 0.48 ± 0.06
N608A 13.64 ± 0.35 4.73 2.88 ± 0.07 12.07 ± 0.33 9.38 1.29 ± 0.04
D611V n.d. n.a. n.a. n.d. n.a. n.a.
W1012A 7.99 ± 0.27 5.01 1.60 ± 0.06 5.41 ± 0.45 6.62 0.82 ± 0.07
Y1028S 7.76 ± 0.22 5.11 1.50 ± 0.04 10.87 ± 0.62 5.66 1.92 ± 0.11

aPurified proteins (20 nM) were incubated at 30°C with 51-mer double-stranded oligonucleotide substrates (20 nM) containing either a single 5-meC:G pair or a T:G mispair. Reaction products were separated in a 12% denaturing polyacrylamide gel and quantified by fluorescence scanning. Shown are the plateau levels of substrate nicking (Pmax) and the time required for processing of 50% of Pmax (T50). Relative processing efficiency was calculated as Erel = Pmax/T50. Values are mean ± SE from two independent experiments.

bn.d., none detected.

cn.a., not applicable.