Table 3 .
Search for AS variants by comparison with sequences from public databases.
| Presence of alternatively spliced transcripts in databases | No alternatively spliced transcripts in databases | |
|---|---|---|
| Lib_1 | ATP1A1* | CDC42SE1 |
| ATP5A1 | CDK5RAP2* | |
| C6orf108 | DDB2 | |
| CAMK2G | EEF2 | |
| CD320 | FARS2 | |
| CTSH | GABARAP | |
| ELF3 | GNB3 | |
| FLNA* | GRK6 | |
| GAPDH | HDAC2 | |
| GNAS | ITGB5* | |
| GNPTAB | MAN2A1 | |
| MAN1B1 | OSBPL8 | |
| NAP1L1 | PSMD6 | |
| PPIB | PTPRA | |
| RANBP1 | 188268 | |
| RPL28 | RBM10* | |
| RPL6 | RNF149 | |
| RPS4X | ROCK2 | |
| SETD2 | RPL11 | |
| SFRS9* | THSD1 | |
| STK25 | ||
| UQCRC1 | ||
| Lib_2 | ALDH3A2* | ACLY |
| AOF2* | ASCC3L1 | |
| CCNB1 | C7orf55 | |
| CREB3 | COL7A1* | |
| DNAJC10 | DDEF1 | |
| FN1* | DENND4C | |
| INTS9 | GDF9 | |
| MYO1C | KIAA0090 | |
| RPS2* | KIAA0152 | |
| RPS5 | MRPL45 | |
| SEC61G | PHF19 | |
| ST13 | PTPLA* | |
| RBMX | ||
| SGSM2 | ||
| SLC4A2 | ||
| TRIP6* | ||
| XPO1 | ||
| Lib_1 & Lib_2 | CLTC* | ATXN10 |
| EIF4A3* | INPP1 | |
| GSPT1* | PAIP1 | |
| KRT18* | ||
| PSMC2* |
*ASSETs selected for RT-PCR validation