Table 2. Genome-wide alterations in OSCC: Losses & Deletions.

Cytoband	Position		Size (Mba)	q value	% Frequency
	Start	End			Losses	Deletions
1q11.1-q21.1	120982663	144003083	23.02	8.00E-06	30	5
1p36.33-p11.1	147134204	147499075	0.36	0.000231	23.3	5
1q24.2	167493797	167507911	0.01	0.00029	21.7	13.3
1q44	246713386	246852155	0.14	0.023854	20	10
2q21.2	133504494	133812256	0.31	8.00E-06	25	13.3
3p26.3-p25.3	39095	9150490	9.11	8.00E-06	45	0
3p14.2	60331268	61710321	1.38	8.00E-06	55	18.3
3p26.3-p11.2	39095	95021186	94.98	8.00E-06	61.7	25
3q26.3	163941201	164138371	0.2	8.00E-06	35	30
4q13.2	68901239	69688431	0.79	8.00E-06	43.3	30
4q13.3	70188483	70296201	0.11	8.00E-06	33.3	25
4q35.2	187570439	188216746	0.65	0.026337	20	0
4q35.2	190706301	191176358	0.47	0.000458	25	1.7
5q11.1-q14.3	49759749	88018996	38.26	8.00E-06	36.7	13.3
6p21.34	29962878	29981959	0.02	8.00E-06	26.7	23.3
6p21.33	29962878	29981959	0.02	8.00E-06	26.7	23.3
6p21.32	32605329	32633715	0.03	8.00E-06	43.3	43.3
6p21.32	32519964	32673012	0.15	8.00E-06	43.3	43.3
8p23.2	3400925	4000623	0.6	8.00E-06	65	25
8p11.23	39378080	39464606	0.09	8.00E-06	68.3	36.7
8p23.3-p11.1	63832	47740040	47.68	8.00E-06	83.3	65
9p24.1-p23	8924024	10013871	1.09	2.32E-05	23.3	6.7
9p21.3	21733439	22076827	0.34	8.00E-06	28.3	10
9p13.1-q21.11	38612224	70225195	31.61	8.00E-06	36.7	6.7
10p15.3-p11.1	138235	42150788	42.01	8.00E-06	35	10
10p11.21	37475290	37508431	0.03	8.00E-06	26.7	3.3
10q11.22	46396192	46516611	0.12	2.83E-05	25	5
11q22.3-q23.1	102611683	110151240	7.54	0.018658	20	0
11q23.3-q25	119044645	133316524	14.27	0.0113	20	0
13p13	6365	44752	0.04	8.00E-06	31.7	23.3
15q11.2	18741744	19805989	1.06	2.83E-05	23.3	8.3
18q12.1-q23	24990733	76110993	51.12	8.00E-06	30	5
19p13.3	8275	236875	0.23	8.00E-06	36.7	11.7
22p13-p11	134684	14797037	14.66	0.00964	21.7	5
22q13.1	37689087	37715408	0.03	8.00E-06	25	18.3

The Thresholds for losses of a single copy and homozygous deletions are set adaptively by the RAE method,

^aMb: mega base pair.