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. 2011 Feb 9;12:23. doi: 10.1186/1471-2156-12-23

Table 3.

Permutation tests for Hudson's statistic.

Gene Subdivisions Kst Ks Kt P valuea
Avr3a A vs B/C -0.023100 0.040122 0.039216 NS
A vs V nan 0.000 0.000 NS
B/C vs V -0.030565 0.043854 0.042553 NS
N vs V 0.037646 1.844118 1.916256 NS
N vs A 0.065266 1.589757 1.700758 NS
N vs B/C 0.127264 0.999764 1.145551 NS

Cox1
A vs B/C -0.021429 0.039286 0.038462 NS
A vs V 0.856818 0.068182 0.476190 <0.001
B/C vs V 0.774561 0.083859 0.371981 <0.001
N vs V 0.487489 0.263577 0.514286 NS
N vs A 0.131826 0.123671 0.142450 NS
N vs B/C 0.093524 0.115370 0.127273 NS

Ras
A vs B/C -nan 0.000 0.000 NS
A vs V 0.300420 0.835913 1.194879 0.001
B/C vs V 0.386997 0.557276 0.909091 <0.001
N vs V 0.237184 1.015038 1.330645 NS
N vs A -nan 0.000 0.000 NS
N vs B/C -nan 0.000 0.000 NS

β-tubulin
A vs B/C 0.071097 0.443943 0.477922 0.001
A vs V 0.022594 0.662711 0.678030 NS
B/C vs V 0.002664 0.161134 0.161565 NS
N vs V 0.082367 1.938315 2.112299 NS
N vs A 0.075742 1.999553 2.163415 NS
N vs B/C 0.178038 1.170111 1.423559 <0.001

Phytophthora infestans population subdivision was tested in the Northern Andean region for Avr3a, Cox1, Ras and β-tubulin.; V: Venezuela; A: Antioquia; N: Nariño; B: Boyacá; C: Cundinamarca.