Table 2. Differentially expressed actin and focal adhesion associated genes in MOSE cell stages.
Gene symbol | Gene Name | Accession Number | I/E | p-val | L/E | p-val |
Actin | ||||||
Acta1 | alpha actin 1 | NM_009606 | −2.2 | 0.0547 | −2.6 | 0.0487 |
Acta2 | alpha actin 2 | NM_007392 | −2.8 | 0.0698 | −19.3 | 0.0139 |
Actg1 * | gamma actin 1 | NM_009609 | −2.1 | 0.0331 | −2.1 | 0.0331 |
Actg2 | gamma actin 2 | NM_009610 | −8.6 | 0.0742 | −12.6 | 0.0552 |
Focal Adhesion | ||||||
Actn1 | actinin, alpha 1 | NM_134156 | −3.8 | 0.0454 | −5.3 | 0.0347 |
Fblim1 | filamin binding LIM protein 1 | NM_133754 | −1.6 | 0.1103 | −2.5 | 0.0282 |
Itga7 | integrin alpha 7 | NM_008398 | −5.3 | 0.0179 | −7.1 | 0.0116 |
Itgav | Integrin alpha V | NM_008402 | −3.7 | 0.0079 | −1.5 | 0.2389 |
Itgb1 | Integrin beta 1 | NM_010578 | −2.1 | 0.0441 | 1.1 | 0.7088 |
Itgb2 | integrin beta 2 | NM_008404 | 7.2 | 0.0059 | 4.1 | 0.0365 |
Itgb5 | integrin beta 5 | NM_010580 | 1.7 | 0.0347 | 2.7 | 0.0313 |
Lasp1 | LIM and SH3 protein 1 | NM_010688 | −1.2 | 0.2772 | −2.7 | 0.0015 |
Nck2 | non-catalytic region tyrosine kinase adaptor protein 2 | NM_010879 | 1.6 | 0.0027 | 2.7 | 0.0097 |
Parva | parvin, alpha | NM_020606 | −2.0 | 0.0646 | −3.3 | 0.0314 |
Pxn | Paxillin | NM_133915 | 1.4 | 0.0765 | 2.2 | 0.0094 |
Tgfb1i1 | TGF beta 1 induced transcript 1 | NM_009365 | −3.7 | 0.0668 | −49.0 | 0.0251 |
Tns1 | tensin 1 | NM_027884 | −2.3 | 0.0520 | −5.1 | 0.0162 |
Vcl | Vinculin | NM_009502 | −2.4 | 0.0658 | −3.8 | 0.0355 |
Zyx | Zyxin | NM_011777 | −3.8 | 0.0383 | −4.5 | 0.0317 |
List of genes differentially regulated (fold differences ≥2, p<0.05) which are structural or regulatory proteins of the actin cytoskeleton. Genes in italics were analyzed by qRT-PCR, in bold were validated to change significantly between MOSE-E and MOSE-L cells, and those not in bold were validated to change significantly (p<0.05) between MOSE-E and MOSE-I cells.
*denotes genes that are already changed in MOSE-I and maintain these expression levels in MOSE-L.