Table 3.
Amino acid changes during consecutive passages of rgVac1 mutants
Passage number | rgVac1sub (H5N1) | rgVac1ins (H5N1) | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
PA | HA | NP | M1 | M2 | HA | NA | M1 | |||||||
65a | 672 | 308 | 338 | 213 | 374 | 89 | 101 | 45 | 157 | 298 | 465 | 171 | 130 | |
P0 | S | L | H | - | R | M | D | R | R | S | M | D | N | L |
P1 | .b | . | Q | Rc | . | . | . | . | H | P | . | E | . | . |
P2 | T | . | Q | R | . | . | . | K | H | P | . | . | . | . |
P3 | . | F | Q | R | Q | V | N | K | H | P | I | . | N/Hd | I |
a Methionine encoded by the AUG start codon is defined as position 1.
b Periods indicate same amino acids as the parental virus.
c Arginine was inserted at the HA cleavage site.
d Amino acid quasispecies were observed.