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. Author manuscript; available in PMC: 2011 May 1.
Published in final edited form as: Nat Genet. 2010 Oct 24;42(11):978–984. doi: 10.1038/ng.687

Table 3. Interaction of NAT2 tagSNP (rs1495741) and GSTM1 deletion with cigarette smoking in bladder cancer risk.

Results from logistic regression analyses of aggregated data adjusted by study. rs1495741 genotypes were classified according to an established approach based on the phenotype of NAT2 acetylators; AA/AG were collapsed to tag rapid/intermediate acetylation, and GG tags slow acetylation.26

Cases
Controls
P
NAT2
(rs1495741)
AA/AG GG AA/AG GG OR 95% CI P Interaction
All subjects 3,784 6,915 5,233 8,182 1.15 1.09 1.22 2.9E-07
By smoking
status
Never smoker 760 1,202 1,679 2,758 0.95 0.85 1.06 3.3E-01 Ref.
Ever smoker 3,024 5,713 3,554 5,424 1.24 1.16 1.32 4.3E-11 6.3E-05
 Former smoker 1,859 3,455 2,300 3,559 1.20 1.11 1.29 6.8E-06 6.7E-04
 Current smoker 1,165 2,258 1,254 1,865 1.27 1.14 1.40 7.2E-06 1.6E-04
GSTM1 Del Present Null Present Null

All subjects 1,319 1,995 1,717 1,726 1.47 1.33 1.62 4.4E-14
By smoking
status
Never smoker 210 346 519 510 1.71 1.38 2.12 6.9E-07 Ref.
Ever smoker 1,109 1,649 1,198 1,216 1.47 1.30 1.67 2.1E-09 1.1E-01
 Former smoker 564 961 622 653 1.62 1.39 1.89 4.7E-10 6.9E-01
 Current smoker 545 688 576 563 1.19 1.00 1.40 4.5E-02 8.1E-03