Table 3. Molecular biological information of each variant among controls (n = 100) and cases (n = 108).

Location (Relative to)
Chromsom start	mRNA start	dsSNP rs#	Region	Protein residue	Amino Acid pos.	dbSNP allele	Controls	SNP pos. c
98655937	−470	rs16896059	Flanking seq			G/A	G/G 55; A/G 34; A/A11	GGCGTCAG
98656002	−405	untitled_1				C/T	C/C 99; C/T 1; T/T 0	ATTCCACCT
98656207	−200	rs2512449				A/G	G/G 38; A/G 43; A/A 19	GTCCACCAA
98656407	1	untitled_2	5′UTR			G/A	G/G 98; A/G 2; A/A 0	TCGCGGCCC
98656788	382	rs118122079	exon_1	Ser-Ser	18	G/A	G/G 99; G/A 1; A/A 0	GCTCGGCCC a
98725970	1681	rs2331652	exon_9	Lys-Lys	451	G/A	G/G 64;A/G 31; A/A 5	AGAAGCAAG a
98736822	—	untitled_3	intron_11			T/C	T/T 89; C/T 9; C/C 2	TCTTTTTTA
98737749	2928	rs2438211	3′UTR			C/T	C/C2928A/A3088T/T354053;	AATACTTTG b
98737909	3088	rs2449512				A/G	C/T2928A/G3088T/C354040;	ATCAATTTC b
98738361	3540	rs1311				T/C	T/T2928G/G3088C/C35407	AAAATGGTT b
98737499	2678	untitled_4				G/T	G/G 99; G/T 1; T/T 0	AAATGCAGTT
98738288	3467	untitled_5				C/T	C/C 99; C/T 1; T/T 0	CCATCCAATG
98738324	3503	untitled_6				A/T	A/A 99; A/T 1; T/T 0	ACAGTATTGC
							Cases
98655937	−470	rs16896059	Flanking seq			G/A	G/G 60; A/G 41; A/A 7	CGGCGTCAG
98656207	−200	rs2512449				A/G	G/G 46; A/G 47; A/A 15	GTCCACCAA
98656788	382	rs118122079	exon_1			G/A	G/G 105; A/G 2; A/A 1	GCTCGGCCC
98703373	1333	untitled_ 7	exon_6	Asp-Glu	335	C/G	C/C 107; C/G 1; G/G 0	AAAAGACTGG a
98711995	1390	untitled_ 8	exon_7	Glu-Glu	354	G/A	G/G 107; G/A 1;A/A 0	CTGAGCCAGT a
98718853	—	untitled_ 9	intron_7			G/C	G/G 107; G/C 1; C/C 0	TTTAGATGGT
98725970	1681	rs2331652	exon_9	Lys-Lys	451	G/A	G/G 52;A/G 46;A/A 10	AGAAGCAAG a
98736822	—	untitled_ 3	intron_11			T/C	T/T 84; C/T 24; C/C 0	TCTTTTTTA
98737749	2928	rs2438211	3′UTR			C/T	C/C2928A/A3088T/T354059;	AATACTTTG b
98737909	3088	rs2449512				A/G	C/T2928A/G3088T/C354038;	ATCAATTTC b
98738361	3540	rs1311				T/C	T/T2928G/G3088C/C354011;	AAAATGGTT b

^aThe double-underlined characters standed for the codon which contains SNP.

^bThe complete linkage among the three SNPs (rs2438211, rs2449512 and rs1311).

^cThe SNP position was emphasized in bolding characters.