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. Author manuscript; available in PMC: 2012 Mar 7.

Published in final edited form as: J Immunol Methods. 2011 Jan 28;366(1-2):69–78. doi: 10.1016/j.jim.2011.01.011

Pre- (panel A) and post- (panel B) normalization box and whisker plots of the ΔC_T values for all specimens, sorted by TLDA plate run order. The vertical axis is log base 2 ΔC_T and the horizontal axis corresponds to specimen ID. The bottom and top of the box represent the 25^th and 75^th percentiles of the probe expression values. The horizontal bar inside the box represents the median. The whiskers extend to either 1.5 times the interquartile range (75^th percentile minus the 25^th percentile) beyond the box or the most extreme point, whichever is shorter. Points beyond that range are shown as circles.

Pre- (panel A) and post- (panel B) normalization box and whisker plots of the ΔC_T values for all specimens, sorted by TLDA plate run order. The vertical axis is log base 2 ΔC_T and the horizontal axis corresponds to specimen ID. The bottom and top of the box represent the 25^th and 75^th percentiles of the probe expression values. The horizontal bar inside the box represents the median. The whiskers extend to either 1.5 times the interquartile range (75^th percentile minus the 25^th percentile) beyond the box or the most extreme point, whichever is shorter. Points beyond that range are shown as circles.