Table 3. SCOP classes (version 1.71) identified in the 8 genome-wide HMMerThread searches.
SCOP Class | Count | Percentage |
Small proteins | 20297 | 24.46% |
Alpha and beta proteins (a+b) | 18250 | 21.99% |
All beta proteins | 15273 | 18.40% |
All alpha proteins | 13407 | 16.16% |
Alpha/beta proteins (a/b) | 10935 | 13.18% |
Membrane and cell surface proteins and peptides | 3185 | 3.84% |
Peptides | 677 | 0.82% |
Multi-domain proteins (alpha and beta) | 578 | 0.70% |
Coiled coil proteins | 377 | 0.45% |
Designed proteins | 7 | 0.01% |