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. 2011 Feb 16;108(10):3952–3957. doi: 10.1073/pnas.1012668108

Table 1.

Effect of single thioxo-bonds on stability and association kinetics of the S-peptide/S-protein complex at pH 6.0, 50 mM NaOAc, 100 mM NaCl, 25 °C

Position of thioxo-bond Keq (M-1) ΔΔG0* (kJ/mol) kon (·105 M-1 s-1) ΔΔG0‡* (kJ/mol) ϕ-value
WT (3.6 ± 0.1)·106 - (4.4 ± 0.2)·105 -
Lys1 (1.3 ± 0.1)·106 2.5 n.d.
Glu2 (1.1 ± 0.1)·106 2.9 n.d.
Thr3 (6.1 ± 0.1)·104 10.1 (3.0 ± 0.1)·105 0.90 0.09
Ala4 (1.4 ± 0.1)·106 2.3 (4.4 ± 0.1)·105 0 -
Lys7 (1.3 ± 0.1)·104 13.9 (4.1 ± 0.3)·105 0.17 0.01
Phe8§ (6.8 ± 0.9)·103 15.5 (2.2 ± 0.1)·105 1.7 0.10
Glu9 (4.0 ± 0.5)·104 11.1 (5.1 ± 0.4)·105 −0.41 −0.04
Arg10 (6.5 ± 0.1)·104 9.9 (4.1 ± 0.3)·105 0.14 0.01
His12§, (1.3 ± 0.3)·103 19.6 n.d. - n.d.
Ser15 (2.9 ± 0.1)·105 6.2 (3.6 ± 0.4)·105 0.46 0.07

*ΔΔG0 represents the difference in free energy between a variant and the WT protein, which has a ΔG0 of -37.4 kJ/mol. ΔG0 was calculated from the equilibrium constant using ΔG0 = -RT ln Keq.

Errors in ϕ-values depend on the errors in Keq and kon as well as on ΔΔG0 and are ≤ 0.05 for the variants used for ϕ-value analysis.

ΔΔG0 too small to determine an accurate ϕ-value (8).

§Stability of the complex was determined by an activity assay (see SI Text and Fig. S3).

Thioxo His12 is strongly destabilized, which does not allow measurement of the association kinetics by stopped-flow fluorescence.