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. 2011 Feb 16;108(10):3952–3957. doi: 10.1073/pnas.1012668108

Table 2.

Effect of side-chain replacements on stability and association kinetics of the S-peptide/S-protein complex at pH 6.0, 50 mM NaOAc, 100 mM NaCl, 25 °C

S-peptide Keq (M-1) ΔΔG0 (kJ/mol) kon (M-1 s-1) ΔΔG0‡ (kJ/mol) ϕ-value
WT (3.6 ± 0.1)·106 (4.4 ± 0.2)·105
WT pH 8.5 (1.2 ± 0.1)·107 −3.0 (9.5 ± 0.6)·105
WT 1% DMSO (2.2 ± 0.1)·106 1.2 (3.4 ± 0.1)·105
WT, low I* (3.0 ± 0.1)·106 0.4 (3.7 ± 0.3)·105 -
A5F (2.6 ± 0.1)·106 0.8 (4.2 ± 0.2)·105 0.12 n.w.d.
A6F (3.6 ± 0.2)·105 5.7 (3.9 ± 0.2)·105 0.25 0.05
K7F (1.9 ± 0.1)·106 1.7 (5.7 ± 0.4)·105 −0.66 < 0
F8Y (2.3 ± 0.3)·104 12.5 (3.4 ± 0.1)·105 0.61 0.05
F8W (1.6 ± 0.2)·105 7.7 (5.0 ± 0.2)·105 −1.79 < 0
F8Nal (1.1 ± 0.1)·106 3.5 (1.5 ± 0.1)·106 −2.42 < 0
E9Q (5.1 ± 0.2)·106 −0.9 (5.7 ± 0.4)·105 −0.67 n.w.d.
E9F (4.0 ± 0.2)·106 −0.3 (1.6 ± 0.1)·106 −3.16 < 0
R10F (7.7 ± 0.3)·105 2.6 (5.8 ± 0.3)·105 −0.70 < 0
Q11F (1.3 ± 0.1)·106 1.3 (3.4 ± 0.1)·105 0 0
H12A (3.1 ± 0.1)·104 11.8 (2.7 ± 0.5)·106 −4.52 < 0
H12F (1.4 ± 0.2)·105 8.0 (3.5 ± 0.9)·106 −5.15 < 0
Nle13A (2.2 ± 0.8)·104 12.6 (2.3 ± 0.1)·105 1.59 0.14
Nle13F (2.4 ± 0.1)·105 6.7 (5.7 ± 0.1)·105 −0.65 < 0
D14F (1.1 ± 0.1)·105 8.6 38 ± 9 28.9 2.7

*Low ionic strength (I) conditions were 10 mM NaOAc, pH 6.0, 25 °C resulting in I = 10 mM.

Stability of the complex was determined by an activity assay (see SI Text and Fig. S3).

Kinetics measured in the presence of 1% DMSO to increase solubility of the S-peptide variant (see Fig. S5).