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. 2011 Feb 15;10:42. doi: 10.1186/1475-2875-10-42

Table 1.

Primers used for pfcrt sequencing and real-time PCR quantification

Exon 1-2
Primary
 E1/2-F CGACATTCCGATATATTATATTTTTAGAC
 E1/2-R TATATGTGTAATGTTTTATATTGG
Nested
 E1/2-NF CCGTTAATAATAAATACACGCAG
 E1/2-NR AATGTTTTATATTGGTAGGTGG
Exon 3-8
Primary
 E3/8-F CCACCTACCAATATAAAACATTAC
 E3/8-R GTTAAAATATATATAAATGTCTC
Nested
 E3/8-NF TATATATATATGTATGTATGTTG
 E3/8-NR AATGTCTCTTATAATTTTGAAATT
Exon 9-13
Primary
 E9/13-F CTTATAATAAAATTTCAAAATTATAAGAGAC
 E9/13-R GAGATCTCTATACCTTCAACATTATTCC
Nested
 E9/13-NF GAGACATTTATATATATTTTAAC
 E9/13-NR CCTTATAAAGTGTAATGCG
pfcrt RT-PCR
pfcrt-F CTTTATTTGTATGATTATGTTCTTTATTGTTTATTCCTTATTTGGA
pfcrt-R AACAGGCATCTAACATGGATATAGCAAA
pfcrt-probe TCGGTGTCGTTCTTTTG
pfmdr RT-PCR
pfmdr-F GCATTCGGTTTTTGGTATGGTACAA
pfmdr-R CCTAATAAAATGGATATAACTGAGGCACCA
pfmdr-probe ACGAATCAATACCCCAATAAT
EF-1a RT-PCR
EF-1a-F GGCAGAAAGAGAAAGAGGTATTACCA
EF-1a-R CCTGGTGCATCAATGACAGTAAAGA
EF-1a-probe TTATGGAAATTTGAAACCCC