Table 1.
Clade | h | π | Province | Location | Haplotype no. | n | Coordinates | mtDNA | Microsatellite | ||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A | h | π | GenBank Accession No. | Ho | He | Rs | Fis | ||||||||
MEP | 0.994 | 0.041 | Anhui | AH1 | 1-6 | 7 | N31° 33' E118° 05' | 6 | 0.950 ± 0.100 | 0.030 ± 0.019 | GU013475-GU013480 | 0.50 ± 0.12 | 0.68 ± 0.13 | 1.43 | 0.25 |
Anhui | AH2 | 7-12 | 7 | N29° 47' E118° 10' | 6 | 0.952 ± 0.096 | 0.022 ± 0.014 | GU013481-GU013486 | 0.49 ± 0.22 | 0.63 ± 0.23 | 1.63 | 0.24 | |||
Jiangsu | JS | 3,13-14 | 10 | N31° 22' E119° 48' | 3 | 0.949 ± 0.044 | 0.050 ± 0.027 | GU013477,GU013487,GU013488 | 0.59 ± 0.25 | 0.60 ± 0.23 | 1.52 | 0.05 | |||
Zhejiang | ZJ | 14-26 | 17 | N30° 06' E120° 02' | 13 | 0.600 ± 0.131 | 0.028 ± 0.016 | GU013488,GU013489-GU013500 | 0.54 ± 0.37 | 0.69 ± 0.17 | 1.43 | 0.04 | |||
Jiangxi | JX | 27-34 | 11 | N26° 36' E114° 12' | 8 | 0.956 ± 0.054 | 0.027 ± 0.015 | GU013501-GU013508 | 0.52 ± 0.11 | 0.71 ± 0.17 | 1.44 | 0.13 | |||
Chongqing | CQ2 | 35 | 2 | N30° 58' E108° 08' | 1 | - | - | GU013509 | 0.53 ± 0.01 | 0.56 ± 0.03 | 1.50 | 0.11 | |||
SWP | 0.972 | 0.023 | Chongqing | CQ1 | 36 | 7 | N29° 16' E107° 50' | 1 | - | - | GU013510 | 0.43 ± 0.26 | 0.58 ± 0.18 | 1.51 | 0.17 |
Hunan | HN | 37-41 | 6 | N28° 17' E109° 39' | 5 | 0.810 ± 0.172 | 0.015 ± 0.009 | GU013511-GU013515 | 0.58 ± 0.22 | 0.71 ± 0.29 | 1.62 | 0.19 | |||
Guizhou | GZ1 | 42-45 | 6 | N27° 59' E107° 11' | 4 | 0.600 ± 0.175 | 0.007 ± 0.005 | GU013516-GU013519 | 0.70 ± 0.42 | 0.74 ± 0.10 | 1.47 | 0.05 | |||
Guizhou | GZ2 | 46-47 | 7 | N28° 23' E106° 25' | 2 | 0.997 ± 0.127 | 0.032 ± 0.020 | GU013520,GU013521 | 0. 63 ± 0.22 | 0.73 ± 0.24 | 1.73 | 0.18 | |||
Yunnan | YN1 | 1,13 | 6 | N22° 36' E100° 43' | 2 | 0.500 ± 0.250 | 0.004 ± 0.003 | GU013475,GU013487 | 0.69 ± 0.34 | 0.75 ± 0.13 | 1.75 | 0.02 | |||
Yunnan | YN2 | 1 | 7 | N22° 46' E100° 05' | 1 | - | - | GU013475 | 0.57 ± 0.29 | 0.72 ± 0.20 | 1.63 | 0.22 | |||
Yunnan | YN3 | 1 | 6 | N25° 03' E102° 42' | 1 | - | - | GU013475 | 0.55 ± 0.26 | 0.71 ± 0.12 | 1.54 | 0.25 | |||
Yunnan | YN4 | 13 | 6 | N26° 28' E100° 50' | 1 | - | - | GU013487 | 0.61 ± 0.32 | 0.70 ± 0.19 | 1.60 | 0.22 | |||
SH | 0.951 | 0.022 | Guangxi | GX | 48-49 | 7 | N25° 24' E110° 41' | 2 | 0.730 ± 0.220 | 0.007 ± 0.004 | GU013522, GU013523 | 0.61 ± 0.36 | 0.69 ± 0.29 | 1.60 | 0.13 |
Guangdong | GD1 | 50-51 | 6 | N24° 46' E113° 34' | 2 | 0.930 ± 0.165 | 0.012 ± 0.008 | GU013524, GU013525 | 0.57 ± 0.19 | 0.59 ± 0.26 | 1.53 | 0.24 | |||
Guangdong | GD2 | 50,52-53 | 8 | N24° 44' E113° 31' | 3 | 0.453 ± 0.245 | 0.025 ± 0.019 |
GU013524, GU013526, GU013527 |
0.44 ± 0.21 | 0.52 ± 0.27 | 1.49 | 0.23 |
MEP represents Middle East Plain; SWP represents Southwest Plateau; and SH represents South Hills. The number of individuals per population (n), number of haplotypes (A), haplotype diversity (h), nucleotide diversity (π), observed heterozygosities (HO), expected heterozygosities (HE), allelic richness (RS), inbreeding coefficients (Fis).