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. 2010 Aug 25;35(12):2392–2402. doi: 10.1038/npp.2010.120

Table 1. Common nAChR Subunit Gene Variant Associations with the FTND Score.

SNP ID A1a A2b Gene Type MAF Add Pc Dom Pd
rs2280781 C T CHRNB2 5′ UTR 0.101 0.221 0.280
rs4845378 G T CHRNB2 Intron 0.097 0.258 0.258
rs2072660 T C CHRNB2 3′ UTR 0.244 0.003 0.006
rs2072661 G A CHRNB2 3′ UTR 0.245 0.002 0.004
rs4292956 C T CHRNB2 3′ UTR 0.066 0.472 0.476
rs2472553 G A CHRNA2 Non-syn 0.139 0.571 0.493
rs13277254 G A CHRNB3 Up 0.234 0.829 0.875
rs13280301 A G CHRNB3 Up 0.178 0.675 0.798
rs6474413 C T CHRNB3 Up 0.232 0.746 0.702
rs4950 G A CHRNB3 5′ UTR 0.236 0.808 0.854
rs2304297 G C CHRNA6 3′ UTR 0.244 0.557 0.985
ss161151744 C T CHRNA7 Syn 0.066 0.314 0.314
rs569207 C T CHRNA5 Intron 0.196 0.134 0.149
rs16969968 G A CHRNA5 Non-syn 0.367 0.433 0.322
rs615470 T C CHRNA5 3′ UTR 0.381 0.330 0.329
rs8192482 C T CHRNA5 3′ UTR 0.368 0.489 0.388
rs564585 A G CHRNA5 3′ UTR 0.237 0.080 0.139
rs12899226 T G CHRNA3 Down 0.052 0.104 0.104
rs660652 A G CHRNA3 3′ UTR 0.383 0.283 0.329
rs472054 A G CHRNA3 3′ UTR 0.379 0.381 0.367
rs578776 A G CHRNA3 3′ UTR 0.247 0.053 0.112
rs1051730 G A CHRNA3 Syn 0.367 0.455 0.359
rs3743075 T C CHRNA3 Syn 0.378 0.292 0.305
rs3743074 G A CHRNA3 Intron 0.378 0.336 0.324
rs8040868 T C CHRNA3 Syn 0.429 0.981 0.813
rs8192475 C T CHRNA3 Non-syn 0.050 0.094 0.094
rs12914008 G A CHRNB4 Non-syn 0.051 0.100 0.100
rs3813567 G A CHRNB4 Up 0.157 0.370 0.275
rs2302765 T C CHRNB1 Intron 0.159 0.729 1.000
rs12452047 A G CHRNB1 Intron 0.166 0.616 0.808
rs7210231 C A CHRNB1 Intron 0.199 0.124 0.017
rs2302761 C T CHRNB1 Intron 0.202 0.233 0.078
rs2302763 T C CHRNB1 Intron 0.164 0.679 0.889
rs2302764 T C CHRNB1 3′ UTR 0.160 0.049 0.045
rs3827020 T C CHRNA4 Intron 0.143 0.521 0.865
rs45442394 G A CHRNA4 Intron 0.060 0.431 0.717
rs1044397 C T CHRNA4 Syn 0.492 0.305 0.608
rs1044396 G A CHRNA4 Syn 0.488 0.215 0.467
rs2229960 A G CHRNA4 Syn 0.057 0.870 0.758
rs2229959 C A CHRNA4 Syn 0.119 0.837 0.806
rs1044394 A G CHRNA4 Syn 0.067 0.784 0.678
rs6090384 T C CHRNA4 Intron 0.060 0.830 0.933
rs2273505 C T CHRNA4 Intron 0.062 0.740 0.725
rs2273506 G A CHRNA4 Syn 0.061 0.580 0.562
a

A1=allele 1.

b

A2=allele 2.

c

Add=additive model.

d

Dom=dominant model.

The bold values are for P<0.05.