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. Author manuscript; available in PMC: 2012 Jan 15.
Published in final edited form as: J Comput Chem. 2011 Jan 15;32(1):81–98. doi: 10.1002/jcc.21601

Figure 4.

Figure 4

Uridylate kinase - adenosine monophosphate complex (PDB ID: 1UKZ). Binding geometries obtained by docking calculations compared to the experimental geometry (red sticks): a) ligand docking pose (green sticks) for the protein experimental structure (green cartoons); b) ligand docking pose (light blue sticks) for a protein model of high quality (cyan cartoons); c) ligand docking pose (yellow sticks) for a protein model of medium quality (yellow cartoons); d) ligand docking pose (blue sticks) for a protein model of low quality (blue cartoons).

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