TABLE 1.
Complete list of HWE-HK proteins
| Organisma | Family | Descriptionb,c | Accession no. |
|---|---|---|---|
| α-Proteobacteria | |||
| M. loti (10) | Rhizobiaceae | PAS | NP_103297, NP_109506, NP_435303 |
| TM | NP_109454, NP_104759, NP_107208 | ||
| GAF | NP_104746 | ||
| NP | NP_109528, NP_108261, NP_355125 | ||
| A. tumefaciens (9) | Rhizobiaceae | PAS | NP_535898, NP_535747, NP_535749 |
| phy | NP_355125 | ||
| HAMP | NP_534648 | ||
| RR | NP_532667, NP_354961 | ||
| NP | NP_534647, NP_535462 | ||
| R. palustris (9) | Rhizobiaceae | PAS | ZP_00009295, ZP_00012323, ZP_00010346, ZP_00009610 |
| phy | ZP_00010576 | ||
| GAF | ZP_00011648, ZP_00008817 | ||
| Methyltransferase | ZP_00012831 | ||
| NP | ZP_00011650 | ||
| S. meliloti (8) | Rhizobiaceae | PAS | NP_435303 |
| GAF | NP_437596, NP_436177, NP_435785, NP_386540 | ||
| HAMP | NP_384348 | ||
| Methyltransferase | NP_437036 | ||
| NP | NP_436373 | ||
| B. japonicum (6) | Rhizobiaceae | PAS | NP_774348 |
| TM | NP_767532, NP_769435 | ||
| GAF | NP_774679 | ||
| RR | NP_769238 | ||
| NP | BAC52448 | ||
| B. melitensis (2) | Rhizobiaceae | PAS | NP_539291, NP_541657 |
| B. suis (2) | Rhizobiaceae | PAS | NP_698641, NP_699772 |
| R. leguminosarum (2) | Rhizobiaceae | phy | CAC95194 |
| NP | CAC34400 | ||
| C. crescentus (9) | Caulobacteriaceae | PAS | NP_419653, NP_421842, NP_421357, NP_421964 |
| GAF | NP_419446 | ||
| HAMP | NP_420493, NP_421703 | ||
| RR | NP_422354, NP_421852 | ||
| R. sphaeroides (6) | Rhodobacteriaceae | PAS | ZP_00005199, ZP_00006599, ZP_00006631 |
| TM | ZP_00008203 | ||
| Methyltransferase | ZP_00007035 | ||
| NP | ZP_00006903 | ||
| N. aromaticivorans (5) | Sphingomonadaceae | PAS | ZP_00093951, ZP_00095689 |
| TM | ZP_00095135, ZP_00095556, ZP_00093204 | ||
| M. magnetotacticum (5) | Rhodospirillaceae | PAS | ZP_00049018, ZP_00049572, ZP_00050069, ZP_00049302, ZP_00052101 |
| R. rubrum (2) | Rhodospirillaceae | PAS | ZP_00016409 |
| TM | ZP_00016683 | ||
| γ-Proteobacteria | |||
| X. campestris (2) | Xanthomonadaceae | PAS | NP_638307 |
| Methyltransferase | NP_639032 | ||
| X. axonopodis (2) | Xanthomonadaceae | PAS | NP_643445 |
| Methyltransferase | NP_644037 | ||
| P. putida (1) | Pseudomonadaceae | phy | AAL50633 |
| P. syringae (1) | Pseudomonadaceae | phy | ZP_00126919 |
a
The number of members of the HWE family in each species is indicated in parentheses.
b
NP, no predicted domains found by SMART.
c
Even though each protein was placed in a single class, many had multiple motifs predicted by SMART.