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. Author manuscript; available in PMC: 2011 Mar 15.
Published in final edited form as: Cell Mol Neurobiol. 2010 Nov;30(8):1377–1381. doi: 10.1007/s10571-010-9592-y

Table 2. Determination of CPE variant copy number in Sporadic PHEO/PGL tumors.

Table 2 shows the expression of CPE variant mRNA copy number in sporadic pheochromocytoma/paraganglioma (PHEO/PGL) samples. Total RNA was extracted from frozen PHEOs/PGLs after homogenization in TRlzol reagent and 0.2μg was then converted to cDNA. A standard curve was set up to determine the CPE mRNA copy numbers by qRTPCR using CPE plasmid construct of eight different concentrations. Copy numbers were calculated using a standard formula. QRTPCR was done on PHEOs/PGLs samples and the crossing point for each sample was plotted on the standard curve to determine the mRNA copy number.

Sample ID Diagnosis* Genotype Copy Numbers
S39 Benign SPORADIC 175,080
S45 BenignΔ SPORADIC 6,181,873
S48 Renign SPORADIC 184,761
S49 Benign SPORADIC 181,713
S67 Benign SPORADIC 135,279
S71 Benign* SPORADIC 6,451,057
S76 Benign& SPORADIC 7,228,701
*

At the time of surgery

#

Large tumor (8cms)

Δ

Thyroid Cancer

&

Capsular and vascular invasion