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. 2000 Nov 1;19(21):5916–5929. doi: 10.1093/emboj/19.21.5916

Table III. Escherichia coli strains and plasmids.

Strain or plasmid Genotype or markers Reference
K37 galK, rpsL Miller and Friedman (1980)
JC10240 Hfr(PO45) thr-3000 recA56 srl-300::Tn10 relA ilv-318 spoT1 thi-1 rpsE2300 Csonka and Clark (1980)
PAL421Tr fmsΔ1, galK, rpsL, recA56, srl-300::Tn10 Meinnel and Blanquet (1994)
PAL314Tr mapΔ1, galK, rpsL, recA56, srl-300::Tn10 this work
JM101Tr supE, thi, Δ(lac-pro), recA56, srl-300::Tn10, F′(traD36, proA+B+, lacIq, lacZΔM15) Hirel et al. (1988)
pBluescriptSK bla Stratagene
pBEBNB derivative of pBluescript SK with the BglII and NcoI sites inserted between the EcoRI and BamHI sites Meinnel et al. (1993a)
pQE60 bla, C-terminal His6-tag fusion vector Qiagen
pMAK705 cat, thermosensitive pSC101 replicon Hamilton et al. (1989)
pUCdef derivative of pUC18 with a chromosomal fragment from E.coli, fms, fmt′ Meinnel and Blanquet (1993)
pMGDA-GFP derivative of pSmRS-GFP with a SalII–NcoI fragment carrying the complete sequence of chloroplast membrane lipid MGDA synthetase from spinach fused in-frame to GFP personal gift of E.Maréchal (Grenoble)
pXL1071 bla, map Mayaux et al. (1987)
pXΔ bla, mapΔ1 this work
pM1A derivative of pBluescriptSK with the full-length cDNA encoding A.thaliana MAP1A this work
pM1B derivative of pBluescriptSK with the full-length cDNA encoding A.thaliana MAP1B this work
pM1C derivative of pBluescriptSK with the full-length cDNA encoding A.thaliana MAP1C this work
pM1D derivative of pBEBNB with the full-length cDNA encoding A.thaliana MAP1D this work
pM2 derivative of pBluescriptSK with the full-length cDNA encoding A.thaliana MAP2 this work
pD1a derivative of pBluescriptSK with the full-length cDNA encoding A.thaliana PDF1A this work
pDLe1b derivative of pBEBNB with the full-length cDNA encoding L.esculentum PDF1B this work
pDAt1b derivative of pBEBNB with the full-length cDNA encoding A.thaliana PDF1B this work
pHuPD derivative of pBluescriptSK with the full-length cDNA encoding the H.sapiens PDF homologue this work
pMap derivative of pMAK705, map this work
pQdef1a derivative of pQE60 and pD1a with an NcoI–BamHI insertion containing the whole A.thaliana PDF1A ORF (starting at third ATG) cloned between the NcoI and BglIII sites in-frame with the 6-His tag this work
pQdef1b derivative of pQE60 with an NcoI–BglIII insertion containing the whole L.esculentum PDF1B cDNA and the 3′ untranslated sequence cloned between the NcoI and BamHI sites this work
pQdef1aΔN same as pQdef1a but lacking codons 2–78 of the def gene this work
pQdef1bΔN same as pQdef1b but lacking codons 2–83 of the def gene this work
pSmGFP bla, CamV35S-smGFP-NosT Davis and Vierstra (1998)
pSmRSGFP bla, CamV35S-smRSGFP(S65T)-NosT Davis and Vierstra (1998)
pDG1a derivative of pSmGFP with an XbaI–BamHI fragment carrying the complete 5′ sequence of A.thaliana PDF1A (up to codon I83) inserted in-frame in between XbaI and BamHI this work
pDG1aΔ1 same as pDG1a1a but deletion of the first 18 bases (including ATG1) this work
pDG1aΔ2 same as pDG1a1a but deletion of the first 39 bases (including ATG1 and ATG2) this work
pDRG1a same as pDG1a, but derivative of pSmRS-GFP this work
pDRG1aΔ1 same as pDG1aΔ1, but derivative of pSmRS-GFP this work
pDRG1aΔ2 same as pDRG1aΔ2, but derivative of pSmRS-GFP this work
pDG1b derivative of pSmGFP with an XbaI–BamHI fragment carrying the complete 5′ sequence of A.thaliana PDF1B (up to codon I82) inserted in-frame in between XbaI and BamHI this work
pDG2b derivative of pSmGFP with an XbaI–BamHI fragment carrying the complete 5′ sequence of L.esculentum PDF1B (up to codon I89) inserted in-frame in between XbaI and BamHI this work
pDRG1b same as pDG1b, but derivative of pSmRS-GFP this work
pMG1a derivative of pSmGFP with an XbaI–BamHI fragment carrying the 5′ sequence of A.thaliana MAP1A (up to codon I141) inserted in-frame in between XbaI and BamHI this work
pMG1b derivative of pSmGFP with an XbaI–BamHI fragment carrying the 5′ sequence of A.thaliana MAP1A (up to codon I126) inserted in-frame in between XbaI and BamHI this work
pMG1c derivative of pSmGFP with an XbaI–BamHI fragment carrying the 5′ sequence of A.thaliana MAP1A (up to codon I99) inserted in-frame in between XbaI and BamHI this work
pMG1d derivative of pSmGFP with an XbaI–BamHI fragment carrying the 5′ sequence of A.thaliana MAP1A (up to codon L105) inserted in-frame in between XbaI and BamHI this work
pMG2 derivative of pSmGFP with an XbaI–BamHI fragment carrying the 5′ sequence of A.thaliana MAP2A (up to codon I126) inserted in-frame in between XbaI and BamHI this work
pMRG2 same as pMG2, but derivative of pSmRS-GFP this work