Table 3. Environmental interaction detection in Monte Carlo simulation experiment (200 replicates).
QTL | True value | Estimate | ||||||
Chr. | Position (cM) | Variance | r 2 (%) | Power (%) | Position (cM) | Variance | r 2 (%) | |
Main-effect | 1 | 70.3 | 0.926 | 5.0 | 100.0 | 70.3(0.0) | 0.8934(0.2176) | 4.94(1.21) |
262.8 | 0.926 | 5.0 | 99.5 | 262.8(0.0) | 0.8912(0.2131) | 4.92(1.15) | ||
2 | 401.4 | 0.370 | 2.0 | 95.0 | 401.4(0.0) | 0.3552(0.1366) | 1.96(0.74) | |
438.8 | 0.556 | 3.0 | 99.0 | 438.8(0.0) | 0.5215(0.1589) | 2.88(0.86) | ||
3 | 601.6 | 0.926 | 5.0 | 100.0 | 601.6(0.0) | 0.8816(0.2125) | 4.87(1.15) | |
8 | 1653.4 | 0.185 | 1.0 | 58.0 | 1653.4(0.4) | 0.2097(0.0858) | 1.15(0.47) | |
1747.6 | 0.370 | 2.0 | 93.5 | 1747.6(0.0) | 0.3384(0.1372) | 1.87(0.76) | ||
9 | 1944.7 | 1.852 | 10.0 | 100.0 | 1944.7(0.0) | 1.8511(0.3121) | 10.22(1.59) | |
10 | 2145.2 | 0.926 | 5.0 | 100.0 | 2145.2(0.0) | 0.9322(0.2352) | 5.15(1.23) | |
2181.6 | 0.926 | 5.0 | 100.0 | 2181.6(0.0) | 0.9081(0.2051) | 5.02(1.09) | ||
Environment | 0.926 | 5.0 | 96.0 | 0.8744(0.2580) | 4.82(1.39) | |||
Environmental | 1 | 55.6 | 0.463 | 2.5 | 97.0 | 55.6(0.0) | 0.4229(0.1391) | 2.33(0.75) |
interaction | 2 | 401.4 | 0.463 | 2.5 | 98.0 | 401.4(0.0) | 0.4465(0.1678) | 2.46(0.88) |
438.8 | 0.926 | 5.0 | 100.0 | 438.8(0.0) | 0.8867(0.2100) | 4.90 (1.12) | ||
3 | 682.7 | 0.926 | 5.0 | 100.0 | 682.7(0.0) | 0.9016(0.2190) | 4.98(1.19) | |
8 | 1747.6 | 1.852 | 10.0 | 100.0 | 1747.6(0.0) | 1.8344(0.2903) | 10.13(1.47) | |
False positive rate (%) | 0.0550 |