Table 1. Summary of gene-centric analysis results for different phenotypic neuroblastomas.
Gene Symbols | Chromosome | Start- Stop | N° of SNP | Overall Discovery P-values | Overall Replication P-values | High-risk Discovery P-values | High-risk Replication P-values | Low-risk Discovery P-values | Low-risk Replication P-values |
BARD1 | 2q35 | 215301519-215382673 | 28 | 9.92×10−11 | 2.19×10−03 | <1.00×10−30 | 3.00×10−03 | 1.62×10−01 | 6.49×10−01 |
FLJ44180 | 6p22.3 | 22243164-22255401 | 8 | <1.00×10−30 | 1.94×10−04 | <1.00×10−30 | 5.45×10−03 | 1.40×10−03 | 3.66×10−02 |
LMO1 | 11p15.4 | 8202432-8246758 | 29 | 1.80×10−07 | 1.59×10−03 | 2.51×10−08 | 2.82×10−02 | 1.40×10−02 | 5.46×10−02 |
DUSP12 | 1q23.3 | 159986204-159993576 | 4 | 1.16×10−07 | 3.30×10−02 | 4.56×10−04 | 1.97×10−01 | 2.07×10−06 | 2.92×10−02 |
DDX4 | 5q11.2 | 55070534-55148362 | 11 | 2.81×10−05 | 3.11×10−03 | 2.95×10−02 | 2.67×10−01 | 2.94×10−06 | 7.20×10−03 |
IL31RA | 5q11.2 | 55183090-55254434 | 18 | 2.75×10−04 | 5.74×10−02 | 2.88×10−01 | 7.28×10−01 | 6.54×10−07 | 1.48×10−02 |
HSD17B12 | 11p11.2 | 43658718-43834745 | 22 | 1.29×10−04 | 3.05×10−02 | 6.82×10−02 | 3.82×10−01 | 4.20×10−07 | 5.37×10−02 |
Bold-faced p-values indicate significant association signals with Bonferroni correction over 15,885 genes.