Table 3. Top 10 multiple sclerosis SNP pairs difference of correlation coefficient, FastEpistasis and logistic regression P-values.
| Top 10 multiple sclerosis SNP pairs ranked by FastEpistasis | ||||||||
|---|---|---|---|---|---|---|---|---|
| Ranking | SNP1 name | SNP2 name | Difference of R | Difference of R P-value | FastEpistasis P-value | Lreg-SNP1 P-value | Lreg-SNP2 P-value | Lreg-interaction P-value |
| 1 | rs1392773 | rs1384731 | 0.35723 | 3.68E-11 | 3.78E-12 | 7.00E-01 | 9.90E-01 | 4.28E-12 |
| 2 | rs1552621 | rs6817936 | 0.34409 | 2.00E-10 | 5.87E-11 | 7.85E-01 | 6.75E-01 | 6.71E-11 |
| 3 | rs11710441 | rs13226149 | −0.33441 | 5.92E-10 | 7.28E-11 | 4.79E-01 | 2.21E-01 | 8.66E-11 |
| 4 | rs2218314 | rs1384731 | 0.33107 | 8.68E-10 | 8.19E-11 | 6.11E-01 | 9.99E-01 | 9.34E-11 |
| 5 | rs6738313 | rs3752735 | −0.33932 | 3.18E-10 | 1.03E-10 | 1.91E-01 | 7.18E-01 | 1.12E-10 |
| 6 | rs7593466 | rs11658318 | 0.34033 | 3.14E-10 | 1.07E-10 | 7.66E-01 | 1.83E-01 | 1.01E-10 |
| 7 | rs6758449 | rs10055397 | 0.33889 | 3.64E-10 | 1.09E-10 | 3.23E-01 | 6.90E-01 | 1.16E-10 |
| 8 | rs17648731 | rs7386137 | 0.34748 | 1.22E-10 | 1.10E-10 | 8.15E-01 | 6.03E-01 | 1.05E-10 |
| 9 | rs6550306 | rs10503253 | 0.33773 | 4.17E-10 | 1.52E-10 | 9.32E-01 | 3.58E-01 | 1.66E-10 |
| 10 | rs2542509 | rs2916433 | 0.33511 | 5.04E-10 | 1.71E-10 | 6.94E-02 | 9.53E-01 | 1.81E-10 |