Table 1.
Transcripts with at least 3-fold higher levels in cells treated for 24 hours with cRA alone relative to untreated cells
| (A) SKRC06 treated with cRA: transcripts changed by at least 3 fold | ||||
|---|---|---|---|---|
| NCBI ID | Gene | Fold change + cRA/con | p value | Description |
| NM 003670 | bhlbh2 | 3.8 | 0.000299 | Basic heli-loop-helix domain containing, class b, 2 |
| NM 001795 | cdh5 | 14.8 | 0.000193 | Cadherin 5, type 2. VE-cadherin (vascular epithelium) |
| NM 001807 | cel | 3.8 | 1.48e-06 | Carboxyl ester lipase |
| NM 000783 | cyp26a1 | 40.1 | 0.000198 | Cytochrome p450, family 26, subfamily a, polypeptide 1 |
| NM 019885 | cyp26b1 | 118.6 | 4.13e-06 | Cytochrome p450, family 26, subfamily b, polypeptide 1 |
| NM 001465 | fyb | 3.6 | 0.00133 | Fyn binding protein |
| NM 004751 | gcnt3 | 4.8 | 0.000245 | Glucosaminyl transferase, mucin-type |
| NM 006819 | hop | 0.236 | 0.00284 | Homeodomain-only protein |
| NM 000598 | igfbp3 | 3.5 | 0.0294 | Insulin-like growth factor binding protein 3 |
| NM 000422 | krt17 | 0.2 | 0.000306 | Keratin 17 |
| NM 005564 | lcn2 | 4.3 | 0.000186 | Lipocalin 2 (oncogene 24p3) |
| NM 000582 | spp1 | 16.9 | 0.00376 | Secreted phosphoprotein 1 |
| NM 005416 | sprr3 | 0.331 | 0.000193 | Small proline rich protein 1b |
| NM 001038 | scnn1a | 4.4 | 0.000245 | Sodium channel, nonvoltage-gated 1 alpha |
| NM 003246 | thbs1 | 0.288 | 0.0403 | Thrombospondin 1 |
| NM 014428 | tjp3 | 3.4 | 0.0429 | Tight junction protein 3 (zona occuldens) |
| NM 006074 | trim22 | 3.5 | 0.00425 | Tripartite motif-containing 22 |
| NM 007028 | trim31 | 52.8 | 8.64e-07 | Tripartite motif-containing 31 |
| NM 003810 | tnfsf10 | 4.2 | 0.0138 | Tumor necrosis factor (ligand) superfamily, member 10 |
| (B) SKRC39 treated with cRA: transcripts changed by at least 3 fold | ||||
|---|---|---|---|---|
| NCBI ID | Gene | Fold change | p value | Description |
| NM004753 | Dhrs3 | 3.3 | 0.00686 | Dehydrogenase reductase |
| NM005564 | Lcn2 | 3.1 | 4.26e-5 | Lipocalin 3 (oncogene 24p3) |
(A) Transcripts for SKRC06 are listed in alphabetical order. The fold-change, p value and gene description are shown. (B) Transcripts for SKRC39 are listed in alphabetical order. The fold-change, p value and gene description are shown.