Table 1.
Gene expression was comprehensively profiled in 67LR bright highly tumorigenic cancer cells and 67LR dim cells
| Source | Identifier | Pathway | P | Genes up in 67LR bright | Genes down in 67LR bright |
|---|---|---|---|---|---|
| KEGG | 4510 | Focal adhesion | <10−5 | ITGA6, ITGAV, CAV1, LAMB3, LAMC2, PGF, SPP1, CAV3, IGFIR, LAMA3 | BIRC3 |
| KEGG | 4110 | Cell cycle | <10−5 | SFN, CDKNIC | CDC2 |
| KEGG | 4012 | ErbB signaling pathway | .0009 | NRG2, HBEGF, MYC | AREG |
| KEGG | 4330 | Notch signaling pathway | .0004 | DLL1, MFNG | |
| KEGG | 4150 | mTOR signaling pathway | .005 | HIF1A, PGF, DDIT4 | |
| KEGG | 4310 | Wnt signaling pathway | .0045 | MYC, NFATC1, WNT10A | PRKACB |
| GO | 6979 | Response to oxidative stress | .0013 | APOE, SOD2, HMOX1, PRNP, KRT1 | IDH1 |
| GO | 6916 | Anti-apoptosis | <10−5 | APOE, NOL3, NRG2, BNIP3, SOCS3, HMOX1, PRNP, CRYAB, IGF1R | BIRC3 |
| GO | 6281 | DNA repair | <10−5 | SOD2, FANCE | |
| GO | 1558 | Cell growth | .002 | IGFBP2, DLC | PRSS2, PLCE1, ING3 |
The table lists selected functional pathways that were significantly enriched (adjusted p < .05) among differentially expressed genes between 67LR bright and dim cells, along with selected genes in each pathway showing statistically significant (adjusted p < 0.001) differential expression. Genes are listed according to official symbols in descending order of statistical significance. We added Kremen2 to the Wnt pathway category, but this addition was not considered in statistical analysis.