Table 2.
Statistical analysis of C values
All PDB | All PDB Grubb test | ModBase Avrg | SEM | p-value* | ModBase Grubb test | |
---|---|---|---|---|---|---|
ALA | 0.231044 | 0.110456 | 0.23415 | 0.008241 | < 0.0001 | 0.209014 |
ARG | 0.250174 | 0.250937 | 0.24807 | 0.007983 | < 0.0001 | 0.619477 |
ASN | 0.291478 | 1.031238 | 0.24114 | 0.007697 | < 0.0001 | 0.41512 |
ASP | 0.284103 | 0.891901 | 0.25577 | 0.006413 | < 0.0001 | 0.846569 |
CYS | 0.049616 | 3.537912 | 0.10605 | 0.015752 | - | 3.569219 |
GLN | 0.269657 | 0.61901 | 0.24635 | 0.003538 | < 0.0001 | 0.568817 |
GLU | 0.239099 | 0.041714 | 0.24119 | 0.009349 | < 0.0001 | 0.416409 |
GLY | 0.180482 | 1.065648 | 0.16437 | 0.013395 | 0.0095 | 1.849155 |
HIS | 0.266794 | 0.564918 | 0.24456 | 0.007517 | < 0.0001 | 0.515768 |
ILE | 0.257308 | 0.385715 | 0.24331 | 0.010592 | < 0.0001 | 0.479012 |
LEU | 0.237448 | 0.010533 | 0.22397 | 0.010956 | < 0.0001 | 0.09126 |
LYS | 0.188001 | 0.923608 | 0.2246 | 0.011423 | < 0.0001 | 0.072917 |
MET | 0.248388 | 0.217197 | 0.22974 | 0.008623 | < 0.0001 | 0.078811 |
PHE | 0.242101 | 0.098425 | 0.23494 | 0.008092 | < 0.0001 | 0.232286 |
PRO | 0.275306 | 0.725716 | 0.24454 | 0.005967 | < 0.0001 | 0.515368 |
SER | 0.247612 | 0.202537 | 0.23619 | 0.006565 | < 0.0001 | 0.268905 |
THR | 0.283274 | 0.876241 | 0.23368 | 0.008642 | < 0.0001 | 0.194947 |
TRP | 0.208734 | 0.531918 | 0.23649 | 0.006956 | < 0.0001 | 0.277834 |
TYR | 0.243902 | 0.132448 | 0.22461 | 0.009417 | < 0.0001 | 0.072408 |
VAL | 0.243296 | 0.121006 | 0.22763 | 0.011549 | < 0.0001 | 0.016623 |
Statistical analysis of C values for tendency to cluster. Column titles and abbreviations are as in Table 1.
the p-value refers to pairwise comparison of calculated values (e.g. “ModBase Avrg” values), between Cys and each one of the other amino acids. In the Grubb test column (Grubb's test for outlier, for N=20), outliers with p-value (for the Grubb's test) < 0.05 are shown in bold. As in Table 1, p-value of the Grubb test refers to the significance of the result associated with the Grubb test (in this case, with α=0.05).