Table 1.
SSR type | SSR Number (4,707 contigs) Count/Percentage | SSR Number (181 contigs) Count/Percentage |
---|---|---|
Dinucleotide | 6,059/77.4% | 246/58.6% |
Trinucleotide | 1,103/14.1% | 56/13.3% |
Tetranucleotide | 547/6.9% | 96/22.9% |
Pentanucleotide | 55/0.7% | 7/1.7% |
Hexanucleotide | 67/0.9% | 15/3.5% |
Total | 7,831 | 420 |
The second column indicates all the SSRs with at least four motif repetitions and the third column, the loci where primer pairs with stringent criteria were designed (see Material and Methods section).