Table 2.
SNP type | Allele variations | First analysis Count/Percentage | Second analysis Count/Percentage |
---|---|---|---|
Transition | A↔G | 3319/28.2% | 262/31.2% |
C↔T | 3412/29.0% | 267/31.8% | |
Transversion | A↔C | 1312/11.1% | 71/8.5% |
A↔T | 1777/15.1% | 115/13.7% | |
G↔C | 741/6.3% | 47/5.6% | |
G↔T | 1216/10.3% | 77/9.2% |
For each type of SNP, the number and percentage for the two analyses carried out with different parameters (see Material and Methods section) are reported.