Table 1.
Mutations found in HPRT cDNAs prepared from 6-TG–resistant colonies of T47D, HCT116, and MDA-MB-231 cells
Cell lines | Treatment | Number of clones analyzed | Clones without mutation in the coding sequence | Clones with frameshift mutation(s) | Clones with deletion(s) | Clones with only a single deletion | Clones with one or more exons lacking | Clones with other types of deletions | Clones with insertion(s) | Clones with transition(s) | Clones with transversion(s) |
T47D | Mock | 24 | 0 | 12 | 14 | 17 | 24 | 4 | 1 | 4 | 0 |
Del ex. 3: 11 | Del 1: 7 | ins 1: 1 | Transitions: 5 | ||||||||
Del ex. 2+3: 9 | |||||||||||
Del ex. 4+5: 4 | |||||||||||
T47D | LSMCM | 40 | 0 | 20 | 40 | 25 | 38 | 11 | 3 | 7 | 1 |
Del l ex. 3: 14 | Del 17: 3 | Ins 1: 3 | Transitions: 7 | Transitions: 3 | |||||||
Del ex. 2+3: 16 | |||||||||||
Del ex. 4 + 5: 5 | |||||||||||
Del ex. 2+3+4: 1 | Del 1: 21 | ||||||||||
Del ex. 6+7+8: 1 | |||||||||||
Del ex. 5: 1 | |||||||||||
HCT116 | − Doxycycline | 14 | 1 | 13 | 13 | 0 | 0 | 13 | 4 | 0 | 2 |
Del 2: 1 | Ins 1: 5 | Transitions: 7 | Transversions: 3 | ||||||||
Del 1: 12 | |||||||||||
HCT116 | − Doxycycline | 14 | 1 | 13 | 13 | 0 | 0 | 13 | 4 | 0 | 2 |
Del 2: 1 | Ins 1: 5 | Transversions: 2 | |||||||||
Del 1: 12 | |||||||||||
HCT116 | + Doxycycline | 25 | 4 | 18 | 11 | 0 | 2 | 9 | 13 | 6 | 6 |
Del ex. 3: 1 | Del 1: 16 | Ins 1: 17 | Transitions: 6 | Transversions: 8 | |||||||
Del ex. 2+3: 1 | |||||||||||
MDA-MB-231 | − Doxycycline | 11 | 3 | 8 | 10 | 5 | 8 | 3 | 0 | 1 | 0 |
Del ex. 2+3: 1 | Del 1: 5 | Transitions: 1 | |||||||||
Del ex. 7: 8 | |||||||||||
MDA-MB-231 | + Doxycycline | 24 | 2 | 17 | 21 | 11 | 17 | 9 | 0 | 4 | 2 |
Del ex. 2: 1 | Del 1: 17 | Transitions: 6 | Transversions: 2 | ||||||||
Del ex. 2 + 3: 1 | |||||||||||
Del ex. 7: 16 |
Ex., exon; LSMCM, LPS-stimulated macrophage-conditioned medium; Mock, unstimulated macrophage-conditioned medium.