Table 3.
Contrasting regular and irregular indels. Insertions of all four bases have been described at position 42. The insertion of a C (42.1C) is an irregular term as this position is followed by two C-residues in rCRS. To comply with regularity it is notated at the 3′ end of the C-tract (44.1C). Similar applies to the deletion of block AC at positions 515 and 516. This is transformed to 523- 524-. Bases in bold face denote runs.
| 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | 5 | |||||||||||||||||
| 3 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 4 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | 2 | ||||||
| 9 | 0 | 1 | 2 | 2 | 3 | 4 | 4 | 5 | 6 | 7 | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 0 | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | ||||||
| . | . | |||||||||||||||||||||||||||||||||||
| 1 | 1 | |||||||||||||||||||||||||||||||||||
| 5′ | 3′ | 5′ | 3′ | |||||||||||||||||||||||||||||||||
| rCRS | C | T | C | T | - | C | C | - | A | T | G | rCRS | C | C | A | G | C | A | C | A | C | A | C | A | C | A | C | C | G | C | T | G | ||||
| 42.1C | C | T | C | T | C | C | C | - | A | T | G | 515- 516- | C | C | A | G | C | - | - | A | C | A | C | A | C | A | C | C | G | C | T | G | ||||
| 44.1C | C | T | C | T | - | C | C | C | A | T | G | 523- 524- | C | C | A | G | C | A | C | A | C | A | C | A | C | - | - | C | G | C | T | G |