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. Author manuscript; available in PMC: 2012 Mar 4.
Published in final edited form as: J Proteome Res. 2011 Jan 25;10(3):1228–1237. doi: 10.1021/pr1010058

Figure 2.

Figure 2

(A) The number of peptides and proteins identified and quantified from complex proteome mixtures with known heavy/light (H/L) ratios (H/L = 1:1, 1:5, and 1:10) by Distiller, MaxQuant, and UNiquant, respectively. The H/L ratios of proteome mixtures are indicated at the bottom of the figure. (B) Venn diagram compares the number of peptides identified and quantified by Distiller, MaxQuant, and UNiquant, respectively. Three programs shows different coverage of standard proteome mixture in different mixtures (H/L = 1:1, 1:5, and 1:10).