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. Author manuscript; available in PMC: 2012 Mar 1.
Published in final edited form as: Proteins. 2010 Dec 22;79(3):947–964. doi: 10.1002/prot.22936

Table IV.

Location of CR, if present, in each Prx subfamily

Canonical location of CR Subfamily members with CR in canonical location (%) Subfamily members with only 1 Cys in sequence (%)a Subfamily members with alternative locations for CR (location, %) Uncertainb (%)
BCP/PrxQ Helix α2c (CPXXXXCR) 54 13 Helix α3 7 26
AhpC/Prx1 C-terminusd 99.1 0.4 - 0.5
Prx6 No CR - 40 C-terminus 1.6
Helix α3 0.8
57
Prx5 Helix α5 17 14 - 69e
Tpx Helix α3f 96.4 1.0 - 2.6
AhpEg No CR - 28 Helix α2 56 16
a

If no CR is present, the resolving thiol must come from another protein or a small molecule thiol like glutathione.

b

These sequences contain more than one Cys, however the other Cys are not in a location shown to serve as a CR. Many of these proteins are expected to function as 1-Cys Prxs, but this cannot be proven without experimental verification.

c

Structural designations come from Hall et al 201016.

d

The CR for the AhpC/Prx1 subfamily is found near the C-terminus where it forms a disulfide bond across the B-interface with the CP on its partner subunit. Mycobacterium tuberculosis AhpC contains a third Cys that is present two residues after the canonical CR that may in some cases act as a replacement for the CR 78. While 6.7% of the AhpC/Prx1 proteins contain the CRXC motif, 2.2% contained only the second Cys, providing support for its ability to serve a functional role.

e

This category includes the 16% of Prx5 subfamily members that are fused to a Grx domain.

f

The CR in the Tpx subfamily is located immediately following the highly conserved Trp used as a key residue to create the functional site signatures – Cys92 in Fig 3E.

g

The canonical AhpE from M. tuberculosis has no CR, but a majority of the subfamily members identified here have a putative CR five residues after the CP, similar to the BCP/PrxQ subfamily.