Table 5.
Expression level of genes important for myeloid differentiation
| Genes
|
Presence in the SAGE tag set
|
||||
|---|---|---|---|---|---|
| Name | UniGene ID | Tag | Tag copy | Cluster(s) matched by tag* | GLGI confirmation† |
| AMLI | Hs.129914 | GCCCCCTCCG | 1 | Hs.129914,Hs.127765 | N |
| CEBPA | Hs.76171 | GGCAACTGCG | 2 | Hs.76171 | N |
| CEBPB | Hs.99029 | GCTGAACGCG | 24 | Hs.99029 (AI702318) | Y |
| CEBPD | Hs.76722 | CTCACTTTTT | 24 | Hs.76722 (NM_005195) | Y |
| CBP | Hs.23598 | ACTACAAGGA | 2 | Hs.23598 (AI953646) | Y |
| CAAGCGCTCT | 2 | Hs.23598 (U89355) | Y | ||
| CD11b | Hs.172631 | AGAAGCCGTG | 10 | Hs.172631 (AI631857) | Y |
| CD18 | Hs.83968 | GAGACTTGAG | 15 | Hs.83968 (AI683192) | Y |
| ETO | Hs.31551 | AGCATTGGAT | 4 | Hs.31551 | N |
| FOS | Hs.25647 | TGGAAAGTGA | 207 | Hs.25647 (AW337322),Hs.187890,Hs.18127,Hs.214906 | Y |
| TCAAAAGACC | 30 | Hs.25647 (R84834),Hs.274707 | Y | ||
| GATATAGCTA | 7 | Hs.25647 (BE177025) | Y | ||
| G-CSF receptor | Hs.2175 | CTCCATCCAG | 33 | Hs.2175 (AI273981) | Y |
| Hs.174142 | TGGCTGGCCA | 4 | Hs.174142 | N | |
| Cathepsin G | Hs.100764 | AGGAGGGGAA | 3 | Hs.100764 | N |
| JUN | Hs.78465 | CTAACGCAGC | 32 | Hs.78465 (BF221858) | Y |
| CCTTTGTAAG | 12 | Hs.78465 (AV736058) | Y | ||
| ATGTCTTCGT | 2 | Hs.77039,Hs.78465,Hs.144926 | Hs.77039 (NM_001006) | ||
| JUNB | Hs.198951 | ACCCACGTCA | 22 | Hs.198951,Hs.50915 | N |
| MLL | Hs.199160 | TGCACGTTTT | 110 | Hs.169793,Hs.199160,Hs.279943,Hs.36927, | Hs.169793 (AW073833) |
| Hs.5338,Hs.83450,Hs.173902,Hs.183506 | |||||
| TCAAGTTTAT | 3 | Hs.116468,Hs.130707,Hs.199160,Hs.15871 | Hs.116468 (AA631929) | ||
| TGTTATTTTG | 3 | Hs.199160 (W16724) | Y | ||
| TATAACAGAT | 1 | Hs.199160 | N | ||
| MLL2 | GAAAGGACAT | 1 | Hs.114765 (AW960268),Hs.199160 | Y | |
| MRP8 | Hs.100000 | TACCTGCAGA | 924 | Hs.100000 (AI826354),Hs.256957,Hs.253884 | Y |
| CCGTCTACAG | 13 | Hs.100000 (AA321386) | Y | ||
| AAGAAAGCCA | 8 | Hs.100000 (T99219) | Y | ||
| Myeloperoxidase | Hs.1817 | GCTCCCCTTT | 36 | Hs.1817,Hs.173103 | Hs.292231 (AI054296) |
| TATGTGCGAA | 3 | Hs.1817 (AA883501) | Y | ||
| Myeloid zinc finger protein | Hs.169832 | GTCAGAACAC | 2 | Hs.169832 (AW449715) | Y |
*
Cluster numbers underlined indicate the GLGI-confirmed genes.
†
Y, confirmed by GLGI; N, not confirmed by GLGI, possibly because they were PCR artifacts. The clusters in this column show the detected sequences that do not match to the expected genes.