TABLE 2.
Enzymatic activities of type II DNA topoisomerases
Strain source of subunit for purification |
Enzyme sp acta |
|||||||
---|---|---|---|---|---|---|---|---|
Gyrase |
Topo IV |
|||||||
ParC | ParE | GyrA | GyrB | Supercoilingb | Cleavagec | Decatenationd | Relaxatione | Cleavagef |
- | - | R6 | R6 | 8.6 | 3.7 | - | - | - |
- | - | T14 | R6 | 4.3 (2.0) | 1.0 (3.7) | - | - | - |
R6 | R6 | - | - | - | - | 21.2 | 1.4 | 3.8 |
T1 | R6 | - | - | - | - | 10.6 (2.0) | 0.9 (1.5) | 1.2 (3.2) |
T14 | R6 | - | - | - | - | 6.5 (3.3) | 0.9 (1.5) | 1.4 (2.7) |
T14 | T14 | - | - | - | - | 8.3 (2.5) | 0.7 (2.0) | 1.1 (3.4) |
Activities are in units/mg × 104, and numbers in parentheses are the fold decrease in activity with respect to that of the R6 enzyme.
One unit defined as the amount of enzyme required to convert 50% of 0.4 μg of relaxed pBR322 to the supercoiled form in 1 h at 37°C.
One unit defined as the amount of enzyme required to linearize 20% of 0.4 μg of CCC pBR322 in 30 min at 37°C.
One unit defined as the amount of enzyme required to decatenate 50% of 0.4 μg of kDNA in 1 h at 37°C.
One unit defined as the amount of enzyme required to convert 50% of 50 ng of CCC pBR322 to the open circle form in 1 h at 37°C.
One unit defined as the amount of enzyme required to linearize 50% of 0.4 μg of CCC pBR322 in 30 min at 37°C.