TABLE 3.
Composition and diversity statistics for amoA clone librariesa
Parameter |
Betaproteobacteria |
Archaea (winter) | ||
---|---|---|---|---|
Summer | Winter | Totalb | ||
No. of clones | 92 | 91 | 183 | 45 |
No. of OTUs | 3 | 5 | 6 | 4 |
% Coverage | 100.0 | 97.8 | 98.9 | 100.0 |
Chao1 score | 3 | 6 | 7 | 4 |
Chao1 score 95% CIc | 3-3 | 5.1-18.5 | 6.1-19.7 | 4-4 |
Shannon score | 0.36 | 1.16 | 1.10 | 1.16 |
Shannon score 95% CI | 0.18-0.53 | 1.04-1.28 | 0.98-1.21 | 0.99-1.33 |
Simpson | 0.84 | 0.33 | 0.40 | 0.33 |
Groups are defined at 5% nucleotide acid divergence.
That is, the total of both summer and winter.
CI, confidence interval.