TABLE 1.
STEC isolates used in this study
| Isolate | Serotype | Country | Source | 41-gene P-BIT code | SPT | Reference(s) |
|---|---|---|---|---|---|---|
| ERL05-1904 | O5:NM | New Zealand | Lamb, minced | 611-00000100-1040 | C | 19 |
| ERL04-2204 | O6(rel):NM | New Zealand | Lamb, diced | 651-00000140-1441 | D | 19 |
| ERL05-0344 | O8:H25 | New Zealand | Lamb, diced | 611-00000040-4000 | E | 22 |
| ERL97-0595 | O8:H25 | New Zealand | Meat | 670-00000000-4040 | E | 22 |
| NZRM4160 | O26:H11 | New Zealand | Human | 673-17645330-6362 | B | 31 |
| NZRM4155 | O26:NM | New Zealand | Human | 663-17645330-2362 | B | 19 |
| ERL05-1307 | O38:H26 | New Zealand | Beef, minced | 673-00100100-1040 | E | 22 |
| ERL05-0411 | O68:H4 | New Zealand | Lamb, minced | 711-04122100-1340 | D | 15 |
| ERL05-1850 | O75:H8 | New Zealand | Beef, minced | 433-04100140-5341 | E | 22 |
| ERL02-2853 | O84:H2 | New Zealand | Human | 673-55645160-7042 | C | 15 |
| ERL03-0954 | O84:H2 | New Zealand | Bovine | 653-44644120-7062 | C | 15 |
| NZRM4163 | O84:NM | New Zealand | Human | 673-55244160-7240 | C | 22 |
| NZRM4153 | O91:H21 | New Zealand | Human | 673-00010160-6010 | C | 31 |
| ERL97-3923 | O91:NM | New Zealand | Ovine meat | 453-00010050-7043 | C | 19 |
| ERL04-0388 | O107:H51 | New Zealand | Human | 023-00010000-2342 | D | This study |
| ERL05-1848 | O113:H21 | New Zealand | Beef, minced | 673-65746770-5453 | C | 31 |
| NZRM3616 | O113:H21 | New Zealand | Human | 673-00004160-4410 | C | 31 |
| ERL04-2941 | O117:H7 | New Zealand | Human | 043-00000000-2362 | D | 33, 71 |
| ERL05-1308 | O123:H10 | New Zealand | Lamb, minced | 613-00000140-5341 | E | 2 |
| ERL05-0622 | O128:H2 | New Zealand | Lamb, minced | 611-00000120-7042 | C | 19 |
| ERL06-2014 | O128:H2 | New Zealand | Human | 673-00010040-7003 | C | 19 |
| NZRM4157 | O128:NM | New Zealand | Human | 673-00010140-7543 | D | 15 |
| NZRM4162 | O130:H11 | New Zealand | Human | 672-00000140-6000 | C | 13 |
| ERL99-1671 | O145:NM | New Zealand | Human | 010-55605340-5000 | B | 33 |
| NZRM4166 | O153:H25 | New Zealand | Human | 601-04004040-4043 | C | 22 |
| 96/2998 | O157:[H7] | Australia | Human | 762-77737751-0040 | A | 31 |
| ACC 3634 | O157:H7 | Australia | Human | 772-77737751-0040 | A | 31 |
| CDC 16-98 | O157 | USA | Human | 773-77777770-0000 | A | 31 |
| CDC 20-98 | O157 | USA | Human | 773-77777770-0040 | A | 31 |
| E27 | O157:H7 | New Zealand | Animal | 771-77777770-0000 | A | 31 |
| E47 | O157:H7 | New Zealand | Animal | 773-77777770-0000 | A | 31 |
| E56 | O157:H7 | New Zealand | Human | 773-77777770-0040 | A | 31 |
| ERL01-4131 | O157:H7 | New Zealand | Milk | 713-77777770-0000 | A | 31 |
| ERL02-0927 | O157:H7 | New Zealand | Human | 773-77777370-0000 | A | 31 |
| ERL02-1097 | O157:H7 | New Zealand | Food | 773-77776770-0000 | A | 31 |
| ERL02-2190 | O157:H7 | New Zealand | Human | 773-77777770-0000 | A | 31 |
| ERL02-2447 | O157:H7 | New Zealand | Human | 773-77777770-0000 | A | 31 |
| ERL02-2841 | O157:H7 | New Zealand | Human | 773-77777770-0000 | A | 31 |
| ERL02-3939 | O157:H7 | New Zealand | Human | 773-77777770-0000 | A | 31 |
| ERL02-4897 | O157:H7 | New Zealand | Human | 763-77777770-0000 | A | 31 |
| ERL03-1416 | O157:H7 | New Zealand | Water | 711-76556770-0000 | A | 31 |
| ERL03-4262 | O157:H7 | New Zealand | Venison, minced | 773-77777751-0000 | A | 31 |
| ERL04-3476 | O157:H7 | New Zealand | New Zealand pork | 773-77777751-0002 | A | 31 |
| ERL05-0623 | O157:H7 | New Zealand | Bobby veal | 771-73777770-0041 | A | 31 |
| ERL05-1306 | O157:[H7] | New Zealand | Lamb, diced | 771-77777771-0040 | A | 31 |
| ERL05-1784 | O157:H7 | New Zealand | Australia pork | 733-77777751-0040 | A | 31 |
| ERL06-2084 | O157:[H7] | New Zealand | Water | 753-77777750-0000 | A | 31 |
| ERL06-2442 | O157:H7 | New Zealand | Bovine | 713-77777770-0020 | A | 31 |
| ERL06-2448 | O157:[H7] | New Zealand | Bovine | 713-77777770-0040 | A | 31 |
| ERL06-2456 | O157:H7 | New Zealand | Bovine | 733-77777770-0040 | A | 31 |
| ERL06-2495 | O157:H7 | New Zealand | Bovine | 713-77777770-0000 | A | 31 |
| ERL06-2497 | O157:H7 | New Zealand | Bovine | 773-77577760-0040 | A | 31 |
| ERL06-2503 | O157:[H7] | New Zealand | Bovine | 773-77777770-0000 | A | 31 |
| ERL06-2505 | O157:H7 | New Zealand | Bovine | 733-77777770-0000 | A | 31 |
| ERL06-2517 | O157:H7 | New Zealand | Bovine | 733-77777770-0000 | A | 31 |
| ERL06-2532 | O157:[H7] | New Zealand | Bovine | 733-77777770-0000 | A | 31 |
| ERL08-1225 | O157:H7 | New Zealand | Spring water | 753-77777771-0000 | A | 31 |
| ERL99-3094 | O157:H7 | New Zealand | Water | 713-77777750-0000 | A | 31 |
| ERL99-3231 | O157:H7 | New Zealand | Spring water | 773-77777770-0000 | A | 31 |
| ERL99-4475 | O157:H7 | New Zealand | Bovine | 773-77777770-0000 | A | 31 |
| NZRM3614 | O157:H7 | Australia | Human | 773-73277730-0000 | A | 31 |
| NZRM3647 | O157:H7 | Australia | Human | 773-77777730-0000 | A | 31 |
| NZRM4156 | O157:H7 | New Zealand | Spring water | 773-77777730-0000 | A | 31 |
| NZRM4159 | O157:H7 | New Zealand | Bovine | 773-77777770-0000 | A | 31 |
| NZRM4164 | O157:H7 | New Zealand | Human | 773-77777770-0040 | A | 31 |
| NZRM4168 | O157:H7 | New Zealand | Human | 773-77777770-0000 | A | 31 |
| NZRM4169 | O157:H7 | New Zealand | Human | 773-77377771-0000 | A | 31 |
| ERL02-3185 | O157:NM | New Zealand | Human | 773-77777770-0000 | A | 31 |
| NZRM4150 | O157:NM | New Zealand | Human | 773-77777771-0000 | A | 31 |
| NZRM4165 | O157:NM | New Zealand | Human | 771-77777370-6641 | A | 31 |
| ERL04-0301 | O157:H16 | New Zealand | Human | 651-10100040-0000 | E | 7 |
| ERL05-1845 | O176:H4 | New Zealand | Pork, minced | 713-00022000-1340 | E | This study |
| ERL05-0346 | O176:NM | New Zealand | Human | 771-00022100-1340 | D | This study |
| ERL04-2759 | O177:NM | New Zealand | Human | 473-55245360-5042 | C | 22 |
| ERL98-3865 | Ont:H18a | New Zealand | Human | 611-00002041-4302 | D | 15 |
a
Ont, not O-serotypeable.