. 2011 Feb 4;77(7):2406–2413. doi: 10.1128/AEM.02485-10

TABLE 5.

Identification of putative Rex binding sites upstream of differentially expressed operons

ORF	Gene	Protein description	Rex binding site		Regulation
ORF	Gene	Protein description	Start site	Sequence	Regulation
EF0255	ldh-1	l-Lactate dehydrogenase	232355	TGTAAAAAATGTCACG	Up^a
			232430	TGTGCGTAATTTCACT	Up^a
EF0900	adhE	Bifunctional acetaldehyde-CoA/alcohol dehydrogenase	863992	TGTGAAAAATATCACA	Up^a
			864049	TGTGAAATAGTTAACA	Up^a
EF1314		Aminotransferase AlaT	1281829	AGTGATTTTTGTCCCA	Down^a
EF1353	pdhA	Pyruvate dehydrogenase complex E1 component, alpha subunit	1326691	TGTGAAAATTATCACT	Up^a
EF1613	pflB	Formate acetyltransferase	1570968	TGTGATTAGTATAACA	Up^a
EF3200		ABC transporter, ATP-binding protein	3072879	TGTGAAACGATTTAAA	Up^a
EF3256		Pheromone cAD1 precursor lipoprotein	3133773	TGTGAAATGATGGACA	Down^a
EF3314		Cell wall surface anchor family protein	3201202	TGTTAAAAAACTCACT	Up^a
EF3327		Citrate transporter	3211936	TTTGTATATTCTCACA	Up^a
			3211997	TGTGAAACATTTCTCA	Up^a
EF0020		PTS system, mannose-specific IIAB components	23010	TCTGATTTTTTTCAAA	Up^b
EF0200	fusA	Elongation factor G	194456	AGTAACGTCTATCACA	Up^b
EF0282	fabL	Enoyl-(acyl carrier protein) reductase	268424	TGTGAGAATGATAACA	Up^b
EF0283	fabF	1,3-Oxoacyl-(acyl carrier protein) synthase II	268424	TGTGAGAATGATAACA	Up^b
EF0517		2-Dehydropantoate 2-reductase	479400	AGTGAACATTTTCACA	Down^b
EF1002		Cell division protein DivIVA	959270	TGAGAATGTGTTCATA	Up^b
EF1167	fba	Fructose-bisphosphate aldolase	1138206	TGTGAAAGAATAGACA	Down^b
EF2151	glmS	Glucosamine-fructose-6-phosphate aminotransferase	2053359	AGTGATTTTTGTCTCA	Up^b
EF2550	glyA	Serine hydroxymethyltransferase	2465297	TGTCAGCTTCGTTACA	Down^b
EF3293	guaB	IMP dehydrogenase	3174241	TGTAACAAAAATCACT	Down^b

Found at transcriptomic level.

Found at proteomic level.