TABLE 1.
Degrees of identity and divergence among Sca sequencesa
| Protein | % identity or divergenceb |
||||||||
|---|---|---|---|---|---|---|---|---|---|
| BR |
IK |
||||||||
| ScaA (1,185 aa) | ScaB (374 aa) | ScaC (280 aa) | ScaD (718 aa) | ScaE (494 aa) | ScaA (1,232 aa) | ScaC (274 aa) | ScaD (552 aa) | ScaE (492 aa) | |
| BR | |||||||||
| ScaA | — | 12.3 | 16.1 | 12.7 | 11.7 | 75.3 | 19.7 | 16.8 | 11.4 |
| ScaB | 386.0 | — | 10.7 | 17.4 | 19.8 | 11.2 | 9.9 | 15.5 | 23.0 |
| ScaC | 159.9 | 323.0 | — | 15.4 | 9.3 | 18.9 | 83.6 | 18.6 | 10.7 |
| ScaD | 284.0 | 311.0 | 323.0 | — | 12.8 | 13.5 | 17.2 | 79.5 | 13.4 |
| ScaE | 422.0 | 198.0 | 313.0 | 357.0 | — | 11.5 | 13.9 | 11.9 | 73.2 |
| IK | |||||||||
| ScaA | 27.1 | 426.0 | 174.6 | 282.0 | 466.0 | — | 16.4 | 15.8 | 10.4 |
| ScaC | 155.9 | 313.0 | 18.6 | 332.0 | 298.0 | 165.2 | — | 14.6 | 15.3 |
| ScaD | 296.0 | 325.0 | 292.0 | 23.2 | 362.0 | 305.0 | 285.0 | — | 11.6 |
| ScaE | 430.0 | 186.5 | 292.0 | 317.0 | 26.9 | 482.0 | 285.0 | 335.0 | — |
a
The amino acid sequences of the signal peptide and passenger domain from each of the Sca proteins were used for analysis, and the number of amino acids of (aa) each protein is presented.
b
Values to the left of the dashes are divergences (see Materials and Methods), and those to the right of the dashes are percent identities. BR, Boryong strain; IK, Ikeda strain. Boldface and underlined values are the degrees of identity or divergence between orthologs.