TABLE 2.
Gene | Difference in mRNA level (n-fold)b under the indicated condition |
|||||
---|---|---|---|---|---|---|
Anaerobic growth |
Aerobic growth |
|||||
F4810/72 | F837/76 | PA | F4810/72 | F837/76 | PA | |
Glucose catabolism gene | ||||||
ldhA | −2.5 | −100 | −100 | −2.0 | −100 | −100 |
ldhB | +2.5 | +2.0 | −5.0 | −50 | −100 | −5.0 |
ldhC | +3.2 | +6.2 | +6.5 | +2.2 | +12.3 | +5.4 |
pfl | −4.0 | −1.2 | −2.2 | −1.4 | −3.7 | −3.1 |
pdhA | +1.4 | +1.9 | +1.6 | −1.1 | +1.0 | +1.0 |
pta | −5.0 | −3.3 | −3.8 | −2.5 | −2.0 | +1.5 |
ackA | −3.3 | −2.3 | +1.6 | −1.7 | −1.5 | +2.0 |
adhE | −7.7 | −4.8 | −7.7 | −4.5 | −33.3 | −3.7 |
adhA | −1.1 | +1.7 | +1.7 | +2.3 | −1.8 | +1.1 |
sdhA | −2.2 | +1.0 | −2.5 | +3.0 | +2.9 | +2.4 |
citZ | −100 | −100 | −16.0 | −50.0 | −33.0 | −2.7 |
citB | +1.1 | −12.5 | −10.0 | +2.0 | +1.5 | −2.3 |
mdh | +1.6 | +4.8 | +4.9 | −1.1 | −1.1 | +1.2 |
Enterotoxin gene nhe | −10 | −100 | −100 | −3.1 | −500 | −14.3 |
Regulator genes | ||||||
plcR | +3.0 | +1.4 | +4.2 | +2.9 | +1.1 | −1.1 |
resD | +4.0 | +3.2 | +5.6 | +2.2 | +1.9 | +2.3 |
fnr | +6.7 | +6.2 | +7.5 | −1.8 | +2.4 | +1.5 |
ccpA | −1.4 | −1.1 | −2.3 | −3.6 | −1.7 | −1.2 |
B. cereus cells were grown under oxic and anoxic conditions in controlled batch cultures (pH 7.2) on MOD medium with 30 mM glucose as the carbon source.
Each change (n-fold) represents the mean value of the mRNA levels of one strain sample in relation to that of the F4430/73 sample. For each experiment, two measurements from two independent RNA samples taken from the mid-exponential growth phase (μmax) of the same culture were analyzed in parallel. Each data point is an average of the results of the combined experiments. Only ratios of ≤−2 and ≥+2 were considered significant (i.e., P ≤ 0.05) according to the precision of the method. + and − indicate up- and downregulation of genes, and significant values for upregulation and downregulation are underlined and boldface, respectively.