TABLE 2.
Primers used in this study
Primer | Sequence (5′-3′)a |
---|---|
OxyR5 | GAACTGGGCCCCGTGCTCGCAGC |
OxyR6 | GCAAAGCTTCTGATAGACCTCAGTGGG |
OxyR7 | CGAAAGCTTCTTCAGATACTGGAGTTG |
OxyR8 | GAGAATTCCGACAGCAGTCTCATT |
OxyR9 | GCGAATTCATGCTGTTACCCACGCTCC |
OxyR10 | GGGAAGCTTCGAAGGTCCGATCTCTGAG |
OxyR11 | CAGAATTCGGCGACGAAGCACCCCCAG |
KatG3b,c | CTGGGATCCCCCCTTGCCCCTCGATG |
KatG14B | TCTAAGCTTCCATTGGTAAAATTGAT |
KatG15b | ATGGATCCCTTTTCGCGCCGCAGAATG |
KatG16b | CAGGATCCCCAGGGGTAGGGAGCGG |
KatG17b | GGAAAGCTTGTGGGTTCGAAATGTCC |
KatG19b | CCGGATCCGGAATGGTTTCCTCTATC |
KatGH1b,c,d | AAGCTTCCGTGGCCCATGGGGCATTTG |
Underlined letters indicate restriction enzyme recognition sites, used for cloning purposes.
Also used for EMSA probes.
Also used for amplification of the footprinting probe.
Also used for the primer extension assay.