Fig. 2.

Residue-matching profile (RMP). The query protein is P13001 [Escherichia coli biotin synthesis protein (BIOH)], and the template is PDB1wpr.A. (A) The normalized likelihoods of the predicted residues in the query P13001. (The likelihoods are normalized by the sum of the likelihoods.) The x axis shows the sequence coordinate and the amino acid at the position. (B) The same binding profile as in A, but the residues are ranked in the decreasing order of likelihoods. The catalytic triad (S⁸², D²⁰⁷, and H²³⁵) of P13001 is composed of the three residues with the highest likelihoods: 0.123, 0.097, and 0.091.