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. 2011 Jan 13;286(14):12101–12107. doi: 10.1074/jbc.M110.208934

TABLE 1.

Parameters related to elongation and breakage rates determined by fitting of solution cross-seeding experiments

The values shown were derived from the global fit (see “Experimental Procedures”) of the data of cross-seeding experiments (as displayed in Fig. 5) and the errors shown are the standard error of the global fit of each experiment. ξ1 = k+/L0 and ξ2 = k+ k, where k+ and k are the rate constants for elongation and breakage, respectively, and L0 is the average number of molecular units in a seed fibril, which will be constant for a given batch of seed.

Seed ScUre2p
Soluble protein ScUre2p
SpUre2p
Parameter ξ1 ξ2 ξ1 ξ2
s1·m1 106·s2·m2 s1·m1 106·s2·m2
Batch
    I 3.4 ± 0.2 2.4 ± 0.3 8.0 ± 0.5 1.2 ± 0.3
    II 6.7 ± 0.4 2.7 ± 0.2 14.6 ± 0.6 2.5 ± 0.2
    III 5.7 ± 0.2 2.1 ± 0.2 10.3 ± 0.5 1.1 ± 0.2
Seed SpUre2p
Soluble protein ScUre2p
SpUre2p
Parameter ξ1 ξ2 ξ1 ξ2
s1·m1 106·s2·m2 s1·m1 106·s2·m2
Batch
    I 2.4 ± 0.1 1.7 ± 0.1 6.3 ± 0.3 2.2 ± 0.4
    II 11.7 ± 0.5 3.9 ± 0.6 27.3 ± 1.3 7.9 ± 2.9
    III 4.9 ± 0.2 5.4 ± 0.3 11.2 ± 0.5 6.5 ± 0.7