Table 2.
Genes Aberrantly Regulated in Mutant IDH1 Expressing Melanoma Cells
| Ratio (Mut/Mock) | Gene name | Annotation |
|---|---|---|
| 5.56 | PRKCA | Kinase |
| 4.47 | ATF3 | TF |
| 4.12 | EIF5 | Translation |
| 4.12 | JUN | TF |
| 4.02 | LYPD3 | Membranous |
| 3.7 | MYCN | TF |
| 3.31 | ANKDD1A | |
| 3.26 | SOX8 | TF |
| 0.0839 | BCL11A | ZF |
| 0.159 | KIF5C | Transport |
| 0.169 | RASSF1 | Ras signal |
| 0.178 | HEY1 | TF |
| 0.184 | SDC2 | Membranous |
| 0.219 | RANBP5 | Nuclear import |
| 0.224 | NR2F2 | TF |
| 0.231 | TTC26 | |
| 0.235 | PPP4R1 | Phosphatase |
| 0.239 | ZDHHC23 | |
| 0.25 | JAG2 | Membranous |
| 0.261 | AHNAK2 | |
| 0.273 | C9orf40 | |
| 0.273 | CA13 | |
| 0.274 | LEF1 | TF |
| 0.276 | DHRS1 | Oxidative stress |
| 0.279 | DOCK9 | Adaptor |
| 0.288 | MCTP2 | Membranous |
| 0.289 | ZNF222 | ZF |
| 0.297 | ADH5 | Oxidative stress |
Ratio of average expression (mutant IDH1 clones [Mut]/mock [Mock] clones), gene name, and annotation are shown. False discovery rate is <0.15.
TF, transcription factor; ZF, zinc finger protein.