Table 1. Summary statistics of sequence filtering and alignment of overall chromosomes in pig breeds and in wild boar.
Population | Total raw sequences | Total filtered sequences | Total aligned length | Average Sequence depth |
Large White | 81,501,174 | 45,233,951 | 40,580,400 | 7.8 |
Landrace | 88,002,147 | 43,341,083 | 42,832,864 | 8.3 |
Pietrain | 71,561,104 | 42,242,606 | 51,566,246 | 9.7 |
Duroc | 75,925,390 | 36,424,674 | 37,176,400 | 10.0 |
wild boar | 65,053,290 | 28,723,892 | 29,229,683 | 7.5 |