Table 1.
The putative cis-regulatory elements in the AGPL1 promoter
| Trans-factor | Core sequencea | Sequenceb | Position | Reference |
| SURE | AATAGAAAA | AATAGtAAt (+) | −512 to –504 | Grierson et al. (1994) |
| AATAGtAAA (−) | −608 to −600 | |||
| AATAGcAAA (+) | −150 to −142 | |||
| SURE-like fragments | AATAAAA | aAATAAAAt (−) | −459 to −452 | Kwak et al. (2006) |
| cAATAAAAt (−) | +212 to +218 | |||
| Dof/PBF | nnnwAAAGnnn | ttaAAAAGctt (+) | −1149 to −1139 | Yanagisawa and Schmidt (1999) |
| aaaTAAAGtag (+) | −814 to −804 | |||
| aaaTAAAGaaa (+) | −414 to −404 | |||
| ttaAAAAGtat (+) | −323 to −313 | |||
| aaaAAAAGaaa (+) | −144 to −134 | |||
| caaTAAAGaga (−) | −1254 to −1244 | |||
| tttTAAAGtat (−) | −1154 to −1144 | |||
| tttTAAAGttg (−) | −1125 to −1115 | |||
| aaaAAAAGtct (−) | −1093 to −1083 | |||
| attTAAAGtca (−) | −729 to −719 | |||
| Fruit-specific motif | TGTCACA | ctTGTTACA(+) | −618 to −612 | Yamagata et al. (2002) |
| TtTGTCAGA (+) | +231 to +237 | |||
| TaTTTCACA (−) | −294 to −288 | |||
| E-box | CANNTG | AtCAAATG (+) | −1291 to −1298 | |
| TcCAATTG (+) | −781 to −788 | |||
| GtCAGATG (+) | +232 to +239 | |||
| GARE | TAACAAA | TAACAAA (−) | −1114 to −1108 | Gubler et al. (1999) |
a
N=A+T+C+G, W=A+T.
b
(−), DNA sequence of the antisense strand; (+), DNA sequence of the sense strand.