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. 2011 Feb 16;27(8):1094–1100. doi: 10.1093/bioinformatics/btr074

Table 2.

Optimal number of clusters inferred for the Müller dataset

Experimental datasets Compactness metrics
 Stability metrics
 F-statistic Informativeness metric
Gap statistic Connectivity Dunn index Silhouette width APN AD ADM FOM
MAPK (KEGG ID 04010) 2 2 2 2 4 6 4 6 2 3
Focal adhesion (KEGG ID 04510) 2 2 4 2 2 7 2 5 2 4
Regulation of actin cytoskeleton (KEGG ID 04810) 2 2 10 2 2 11 2 5 3 5