Table I.
MHC class II-bound C. muridarum peptides identified in DCs after 12 h pulsing with live and dead EBs using immunoproteomics
| Peptide Sequencea | Source Protein | Abbreviation |
|---|---|---|
| Live EBs | ||
| VKGNEVFVSPAAHIIDRPG (13) | Ribosomal protein L6 | RplF |
| SPGQTNYAAAKAGIIGFS (3) | 3-Oxoacyl-(acyl carrier protein) reductase | FabG |
| NAKTVFLSNVASPIYVDPA (1) | Polymorphic membrane protein G | PmpG |
| GAFHLFASPAANYIHTGS (5) | Polymorphic membrane protein F | PmpE/F-2 |
| GRDLNVTGPKIQTDVDL (7) | Hypothetical protein TC0420 | TC0420 |
| EGTKIPIGTPIAVFSTEQN (4) | Pyruvate dehydrogenase | TC0518 |
| GANAIPVHCPIGAESQ (3) | Elongation factor G | FusA |
| VFWLGSKINIIDTPG (1) | Elongation factor G | FusA |
| SVPSYVYYPSGNRAPVV (2) | Thiol-disulfide interchange protein | TC0884 |
| FEVQLISPVALEEGMR (2) | Elongation factor Tu | Tuf |
| YDHIIVTPGANADIL (1) | Oxidoreductase | TC0654 |
| LPLMIVSSPKASESGAA (1) | Metalloprotease | TC0190 |
| ISRALYTPVNSNQSVG (1) | Elongation factor Ts | Tsf |
| SRALYAQPMLAISEA (1) | Polymorphic membrane protein E | PmpE/F-1 |
| Dead EBs | ||
| VKGNEVFVSPAAHIIDRPG (4) | Ribosomal protein L6 | RplF |
| SPGQTNYAAAKAGIIGFS (1) | 3-Oxoacyl-(acyl carrier protein) reductase | FabG |
| KPAEEEAGSIVHNAREQ (1) | ATP synthase subunit E | AtpE |
a
Numbers in parentheses denote total number of peptides of varying length but consisting of the same core residues.