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. Author manuscript; available in PMC: 2012 Apr 7.
Published in final edited form as: J Phys Chem B. 2011 Mar 11;115(13):3416–3424. doi: 10.1021/jp201037t

Figure 6.

Figure 6

Distribution of pKa values calculated for Cys74 (the catalytic base of D → L racemization) for E2·D-glu2 and E2·D-glu2·DPA. Each structure, selected via QR factorization of a collection of simulation snapshots, was each used in pKa calculation using the MEAD algorithm from the H++ program18. Details of parameters employed in these pKa calculations are located in the Computational Procedures section of the Materials and Methods.